Information for 5-AGTCTATTGTTTC (Motif 8)

C G T A C A T G A C G T A T G C G A C T G T C A G A C T C A G T A T C G A C G T A G C T A G C T A G T C
Reverse Opposite:
A C T G C T G A C T G A T G C A T A G C G C T A C G T A A C G T C T G A A T C G G T C A G T A C G C A T
p-value:1e-12
log p-value:-2.794e+01
Information Content per bp:1.658
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif2.43%
Number of Background Sequences with motif154.5
Percentage of Background Sequences with motif0.32%
Average Position of motif in Targets52.7 +/- 26.3bp
Average Position of motif in Background51.3 +/- 26.2bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0073.1_Sox7_1/Jaspar

Match Rank:1
Score:0.74
Offset:-4
Orientation:reverse strand
Alignment:----AGTCTATTGTTTC-----
TNNANNTCTATTGTTNTNNANN
 A C G T A C G T A C G T A C G T C G T A C A T G A C G T A T G C G A C T G T C A G A C T C A G T A T C G A C G T A G C T A G C T A G T C A C G T A C G T A C G T A C G T A C G T
C G A T T C A G C G T A C G T A C T G A C G A T C G A T A G T C G A C T C G T A A G C T C G A T T C A G C G A T G A C T G A T C G C A T C G A T G A C T T G C A C G A T C A G T

SOX9/MA0077.1/Jaspar

Match Rank:2
Score:0.74
Offset:3
Orientation:forward strand
Alignment:AGTCTATTGTTTC
---CCATTGTTC-
 C G T A C A T G A C G T A T G C G A C T G T C A G A C T C A G T A T C G A C G T A G C T A G C T A G T C
A C G T A C G T A C G T A G T C G A T C G C T A C A G T C G A T T A C G C G A T G C A T G A T C A C G T

PB0065.1_Sox15_1/Jaspar

Match Rank:3
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-AGTCTATTGTTTC---
ANNTCTATTGTTCNNNA
 A C G T C G T A C A T G A C G T A T G C G A C T G T C A G A C T C A G T A T C G A C G T A G C T A G C T A G T C A C G T A C G T A C G T
C G T A C G T A T C G A A G C T G A T C G C A T C G T A C G A T C G A T C T A G C G A T G A C T G T A C G C T A G T A C G A C T C G T A

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:4
Score:0.71
Offset:2
Orientation:reverse strand
Alignment:AGTCTATTGTTTC
--NCCATTGTTY-
 C G T A C A T G A C G T A T G C G A C T G T C A G A C T C A G T A T C G A C G T A G C T A G C T A G T C
A C G T A C G T C T A G A G T C G A T C G C T A C G A T A C G T A T C G A C G T A G C T G A C T A C G T

PB0070.1_Sox30_1/Jaspar

Match Rank:5
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-AGTCTATTGTTTC--
ANNTCCATTGTTCNNN
 A C G T C G T A C A T G A C G T A T G C G A C T G T C A G A C T C A G T A T C G A C G T A G C T A G C T A G T C A C G T A C G T
C T G A C T G A C A G T C G A T A G T C G T A C G C T A A G C T C A G T T C A G C G A T A G C T T A G C G C T A C G A T G A C T

PB0173.1_Sox21_2/Jaspar

Match Rank:6
Score:0.71
Offset:0
Orientation:forward strand
Alignment:AGTCTATTGTTTC----
AATCAATTGTTCCGCTA
 C G T A C A T G A C G T A T G C G A C T G T C A G A C T C A G T A T C G A C G T A G C T A G C T A G T C A C G T A C G T A C G T A C G T
T G A C T C A G A G C T A T G C G C T A C G T A A G C T C G A T A T C G C G A T A G C T A T G C T G A C A C T G G A T C C A G T T C G A

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.70
Offset:2
Orientation:forward strand
Alignment:AGTCTATTGTTTC
--NCCATTGTTC-
 C G T A C A T G A C G T A T G C G A C T G T C A G A C T C A G T A T C G A C G T A G C T A G C T A G T C
A C G T A C G T A T G C A G T C G A T C C G T A A C G T A C G T A C T G A C G T A G C T G A T C A C G T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:8
Score:0.70
Offset:3
Orientation:forward strand
Alignment:AGTCTATTGTTTC
---CCATTGTTYB
 C G T A C A T G A C G T A T G C G A C T G T C A G A C T C A G T A T C G A C G T A G C T A G C T A G T C
A C G T A C G T A C G T A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G

PB0183.1_Sry_2/Jaspar

Match Rank:9
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:AGTCTATTGTTTC----
CNNNTATTGTTCNNNNN
 C G T A C A T G A C G T A T G C G A C T G T C A G A C T C A G T A T C G A C G T A G C T A G C T A G T C A C G T A C G T A C G T A C G T
A T G C C T G A A G T C A G T C G A C T C G T A A C G T A G C T T C A G G C A T A C G T A G T C G T A C C A T G G C A T C T A G C T G A

PB0072.1_Sox5_1/Jaspar

Match Rank:10
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:AGTCTATTGTTTC---
NNTTTATTGTTCTNNN
 C G T A C A T G A C G T A T G C G A C T G T C A G A C T C A G T A T C G A C G T A G C T A G C T A G T C A C G T A C G T A C G T
G C T A C G A T G C A T G A C T G C A T C G T A G A C T G C A T C T A G G A C T A G C T G A T C G A C T G C T A C G T A G C T A