Information for 14-GCAACACAAA (Motif 31)

A C T G A T G C C G T A C G T A A G T C C G T A A G T C C G T A C G T A C G T A
Reverse Opposite:
A C G T A C G T C G A T A C T G A C G T A C T G A C G T A C G T A T C G A G T C
p-value:1e-6
log p-value:-1.569e+01
Information Content per bp:1.940
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.66%
Number of Background Sequences with motif12.7
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets45.7 +/- 15.0bp
Average Position of motif in Background53.2 +/- 36.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox3/MA0514.1/Jaspar

Match Rank:1
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:GCAACACAAA--
--AAAACAAAGG
 A C T G A T G C C G T A C G T A A G T C C G T A A G T C C G T A C G T A C G T A A C G T A C G T
A C G T A C G T T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GCAACACAAA
TTGCAACATN--
 A C G T A C G T A C T G A T G C C G T A C G T A A G T C C G T A A G T C C G T A C G T A C G T A
C A G T A C G T C T A G A G T C G T C A C G T A G A T C G C T A A G C T G A T C A C G T A C G T

Mouse_Recombination_Hotspot(Zf)/Testis-DMC1-ChIP-Seq(GSE24438)/Homer

Match Rank:3
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---GCAACACAAA-------
GAAGTANCACGAATNMRAGT
 A C G T A C G T A C G T A C T G A T G C C G T A C G T A A G T C C G T A A G T C C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T A G C T G A C T G A C T A G G A C T C T G A T A C G A G T C G C T A G A T C C T A G T C G A T G C A G A C T A C G T G T C A T C A G C T G A C A T G G A C T

PB0121.1_Foxj3_2/Jaspar

Match Rank:4
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----GCAACACAAA---
AACACCAAAACAAAGGA
 A C G T A C G T A C G T A C G T A C T G A T G C C G T A C G T A A G T C C G T A A G T C C G T A C G T A C G T A A C G T A C G T A C G T
G T C A C G T A A G T C C T G A G A T C G A T C T G C A G C T A G T C A C G T A A G T C C G T A C G T A G C T A C A T G T A C G C G T A

PB0166.1_Sox12_2/Jaspar

Match Rank:5
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GCAACACAAA-----
AAACAGACAAAGGAAT
 A C G T A C T G A T G C C G T A C G T A A G T C C G T A A G T C C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T

PB0208.1_Zscan4_2/Jaspar

Match Rank:6
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---GCAACACAAA---
CGAAGCACACAAAATA
 A C G T A C G T A C G T A C T G A T G C C G T A C G T A A G T C C G T A A G T C C G T A C G T A C G T A A C G T A C G T A C G T
G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----GCAACACAAA
SCCTAGCAACAG---
 A C G T A C G T A C G T A C G T A C G T A C T G A T G C C G T A C G T A A G T C C G T A A G T C C G T A C G T A C G T A
A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G A C G T A C G T A C G T

PB0123.1_Foxl1_2/Jaspar

Match Rank:8
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---GCAACACAAA---
ATATCAAAACAAAACA
 A C G T A C G T A C G T A C T G A T G C C G T A C G T A A G T C C G T A A G T C C G T A C G T A C G T A A C G T A C G T A C G T
G C T A C G A T C G T A C G A T G A T C G C T A G C T A G T C A C G T A A G T C C G T A C G T A G T C A C G T A G T A C G T C A

PB0168.1_Sox14_2/Jaspar

Match Rank:9
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GCAACACAAA-----
CTCACACAATGGCGC
 A C T G A T G C C G T A C G T A A G T C C G T A A G T C C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A G T C A C G T A G T C T C G A T A G C C G T A A T G C G T C A G T C A G C A T C T A G T C A G G T A C A C T G A T G C

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:10
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:GCAACACAAA--
--RNAACAATGG
 A C T G A T G C C G T A C G T A A G T C C G T A A G T C C G T A C G T A C G T A A C G T A C G T
A C G T A C G T T C G A T C A G T C G A T C G A A T G C C G T A T C G A G C A T C A T G T A C G