p-value: | 1e-17 |
log p-value: | -3.958e+01 |
Information Content per bp: | 1.641 |
Number of Target Sequences with motif | 107.0 |
Percentage of Target Sequences with motif | 11.81% |
Number of Background Sequences with motif | 2247.5 |
Percentage of Background Sequences with motif | 4.69% |
Average Position of motif in Targets | 49.8 +/- 27.0bp |
Average Position of motif in Background | 49.1 +/- 31.0bp |
Strand Bias (log2 ratio + to - strand density) | -0.6 |
Multiplicity (# of sites on avg that occur together) | 1.06 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer
Match Rank: | 1 |
Score: | 0.86 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | TGCCATTGTT- -NCCATTGTTC |
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Sox2/MA0143.3/Jaspar
Match Rank: | 2 |
Score: | 0.86 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | TGCCATTGTT --CCTTTGTT |
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Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer
Match Rank: | 3 |
Score: | 0.85 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | TGCCATTGTT-- --CCATTGTTYB |
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Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer
Match Rank: | 4 |
Score: | 0.85 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | TGCCATTGTT --CCWTTGTY |
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Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer
Match Rank: | 5 |
Score: | 0.85 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | TGCCATTGTT- -NCCATTGTTY |
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Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer
Match Rank: | 6 |
Score: | 0.85 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | TGCCATTGTT-- --CCWTTGTYYB |
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Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer
Match Rank: | 7 |
Score: | 0.83 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | TGCCATTGTT-- --CCATTGTTNY |
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Sox6/MA0515.1/Jaspar
Match Rank: | 8 |
Score: | 0.82 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | TGCCATTGTT-- --CCATTGTTTT |
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SOX9/MA0077.1/Jaspar
Match Rank: | 9 |
Score: | 0.81 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | TGCCATTGTT- --CCATTGTTC |
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SOX10/MA0442.1/Jaspar
Match Rank: | 10 |
Score: | 0.81 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | TGCCATTGTT ---CTTTGT- |
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