Information for 8-GCGGATTCGT (Motif 20)

A C T G A T G C A C T G A C T G C G T A A C G T A G C T A G T C A T C G A G C T
Reverse Opposite:
C T G A A T G C C T A G C T G A G T C A A C G T A G T C A G T C A T C G A G T C
p-value:1e-9
log p-value:-2.121e+01
Information Content per bp:1.871
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.55%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets45.6 +/- 20.8bp
Average Position of motif in Background48.9 +/- 25.8bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---GCGGATTCGT
NNTGTGGATTSS-
 A C G T A C G T A C G T A C T G A T G C A C T G A C T G C G T A A C G T A G C T A G T C A T C G A G C T
C A T G G A C T G C A T A C T G A G C T A C T G A C T G C G T A G C A T A G C T A T C G T A C G A C G T

PH0015.1_Crx/Jaspar

Match Rank:2
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----GCGGATTCGT--
CGTTGGGGATTAGCCT
 A C G T A C G T A C G T A C G T A C T G A T G C A C T G A C T G C G T A A C G T A G C T A G T C A T C G A G C T A C G T A C G T
A G T C A C T G C G A T C G A T T A C G T A C G C T A G A C T G G T C A A C G T C G A T C G T A C T A G A G T C A T G C C A G T

Crx/MA0467.1/Jaspar

Match Rank:3
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--GCGGATTCGT
AAGAGGATTAG-
 A C G T A C G T A C T G A T G C A C T G A C T G C G T A A C G T A G C T A G T C A T C G A G C T
T C G A C T G A C T A G T C G A C T A G A C T G G T C A A C G T A G C T C G T A C T A G A C G T

PH0035.1_Gsc/Jaspar

Match Rank:4
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---GCGGATTCGT----
NNAAGGGATTAACGANT
 A C G T A C G T A C G T A C T G A T G C A C T G A C T G C G T A A C G T A G C T A G T C A T C G A G C T A C G T A C G T A C G T A C G T
A C G T C G T A G T C A C T G A T A C G C T A G C T A G G T C A A C G T A G C T C G T A C T G A A G T C C A T G C G T A A G C T C G A T

GSC2/MA0891.1/Jaspar

Match Rank:5
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GCGGATTCGT
GNGGATTAGN
 A C T G A T G C A C T G A C T G C G T A A C G T A G C T A G T C A T C G A G C T
C T A G T A G C T C A G C A T G T G C A C G A T C G A T C G T A C T A G A C T G

GSC/MA0648.1/Jaspar

Match Rank:6
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GCGGATTCGT
NNGGATTAGN
 A C T G A T G C A C T G A C T G C G T A A C G T A G C T A G T C A T C G A G C T
C T A G T A C G T C A G T C A G T G C A A C G T G A C T C T G A C T A G A T G C

Dmbx1/MA0883.1/Jaspar

Match Rank:7
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----GCGGATTCGT---
TGAACCGGATTAATGAA
 A C G T A C G T A C G T A C G T A C T G A T G C A C T G A C T G C G T A A C G T A G C T A G T C A T C G A G C T A C G T A C G T A C G T
G C A T C T A G C T G A C G T A G T A C T G A C T C A G A T C G G T C A A C G T G A C T C G T A C T G A A C G T A T C G G C A T C G T A

PH0025.1_Dmbx1/Jaspar

Match Rank:8
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----GCGGATTCGT---
TGAACCGGATTAATGAA
 A C G T A C G T A C G T A C G T A C T G A T G C A C T G A C T G C G T A A C G T A G C T A G T C A T C G A G C T A C G T A C G T A C G T
G C A T C T A G C T G A C G T A G T A C T G A C T C A G A T C G G T C A A C G T G A C T C G T A C T G A A C G T A T C G G C A T C G T A

PH0129.1_Otx1/Jaspar

Match Rank:9
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---GCGGATTCGT----
AGAGGGGATTAATTTAT
 A C G T A C G T A C G T A C T G A T G C A C T G A C T G C G T A A C G T A G C T A G T C A T C G A G C T A C G T A C G T A C G T A C G T
C T A G C A T G C G T A C T A G T A C G C T A G C A T G G T C A A C G T C G A T C G T A C G T A G A C T G C A T G A C T G C T A A G C T

NFYA/MA0060.2/Jaspar

Match Rank:10
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----GCGGATTCGT---
AGAGTGCTGATTGGTCCA
 A C G T A C G T A C G T A C G T A C G T A C T G A T G C A C T G A C T G C G T A A C G T A G C T A G T C A T C G A G C T A C G T A C G T A C G T
G C T A C A T G T G C A T A C G G A C T A C T G A G T C A G C T A T C G C T G A A G C T C G A T T C A G T A C G G A C T A G T C T A G C T C G A