Information for 4-GGCGGCGCTTTTT (Motif 6)

A C T G A T C G A G T C A C T G A C T G A G T C A C T G A G T C A G C T C G A T A C G T A G C T A C G T
Reverse Opposite:
C G T A C T G A C G T A C G T A C T G A A C T G A G T C A C T G A G T C A G T C A C T G A T G C A G T C
p-value:1e-10
log p-value:-2.432e+01
Information Content per bp:1.940
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif1.67%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets48.5 +/- 23.4bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL003.1_GC-box/Jaspar

Match Rank:1
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----GGCGGCGCTTTTT
AGGGGGCGGGGCTG---
 A C G T A C G T A C G T A C G T A C T G A T C G A G T C A C T G A C T G A G T C A C T G A G T C A G C T C G A T A C G T A G C T A C G T
C G T A C T A G C A T G T C A G A C T G C T A G G T A C C T A G A C T G C T A G C A T G A G T C A G C T C A T G A C G T A C G T A C G T

Sp1(Zf)/Promoter/Homer

Match Rank:2
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---GGCGGCGCTTTTT
GGGGGCGGGGCC----
 A C G T A C G T A C G T A C T G A T C G A G T C A C T G A C T G A G T C A C T G A G T C A G C T C G A T A C G T A G C T A C G T
T C A G C A T G C T A G A C T G A C T G A G T C A C T G A C T G C T A G T A C G A G T C A T G C A C G T A C G T A C G T A C G T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:3
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----GGCGGCGCTTTTT
RGKGGGCGGAGC-----
 A C G T A C G T A C G T A C G T A C T G A T C G A G T C A C T G A C T G A G T C A C T G A G T C A G C T C G A T A C G T A G C T A C G T
C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C A C G T A C G T A C G T A C G T A C G T

PB0164.1_Smad3_2/Jaspar

Match Rank:4
Score:0.57
Offset:-6
Orientation:reverse strand
Alignment:------GGCGGCGCTTTTT
NAGANTGGCGGGGNGNA--
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T C G A G T C A C T G A C T G A G T C A C T G A G T C A G C T C G A T A C G T A G C T A C G T
T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A A C G T A C G T

SP1/MA0079.3/Jaspar

Match Rank:5
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---GGCGGCGCTTTTT
GGGGGCGGGGC-----
 A C G T A C G T A C G T A C T G A T C G A G T C A C T G A C T G A G T C A C T G A G T C A G C T C G A T A C G T A G C T A C G T
T C A G C T A G C T A G A C T G A C T G G T A C C T A G A C T G C T A G T C A G T G A C A C G T A C G T A C G T A C G T A C G T

SP2/MA0516.1/Jaspar

Match Rank:6
Score:0.56
Offset:-7
Orientation:reverse strand
Alignment:-------GGCGGCGCTTTTT
GGGNGGGGGCGGGGC-----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T C G A G T C A C T G A C T G A G T C A C T G A G T C A G C T C G A T A C G T A G C T A C G T
T A C G T A C G T A C G T C G A C T A G C T A G C T A G C T A G A C T G G T A C C T A G A T C G C T A G T C A G T A G C A C G T A C G T A C G T A C G T A C G T

POL006.1_BREu/Jaspar

Match Rank:7
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:GGCGGCGCTTTTT
---GGCGCGCT--
 A C T G A T C G A G T C A C T G A C T G A G T C A C T G A G T C A G C T C G A T A C G T A G C T A C G T
A C G T A C G T A C G T C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T A C G T A C G T

SP4/MA0685.1/Jaspar

Match Rank:8
Score:0.54
Offset:-6
Orientation:reverse strand
Alignment:------GGCGGCGCTTTTT
NAAGGGGGCGTGGCTTN--
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T C G A G T C A C T G A C T G A G T C A C T G A G T C A G C T C G A T A C G T A G C T A C G T
C T G A C T G A C G T A C T A G C A T G T C A G A C T G A T C G T G A C A C T G A C G T T C A G C A T G G A T C G A C T C G A T T C G A A C G T A C G T

KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer

Match Rank:9
Score:0.54
Offset:-5
Orientation:reverse strand
Alignment:-----GGCGGCGCTTTTT
NNVDGGGYGGGGCYN---
 A C G T A C G T A C G T A C G T A C G T A C T G A T C G A G T C A C T G A C T G A G T C A C T G A G T C A G C T C G A T A C G T A G C T A C G T
T A C G T G A C T C A G C T G A A C T G A C T G A C T G A G C T A C T G A C T G C T A G A C T G A G T C A G T C C T G A A C G T A C G T A C G T

KLF5/MA0599.1/Jaspar

Match Rank:10
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--GGCGGCGCTTTTT
GGGGNGGGGC-----
 A C G T A C G T A C T G A T C G A G T C A C T G A C T G A G T C A C T G A G T C A G C T C G A T A C G T A G C T A C G T
C T A G C T A G A C T G A C T G G A T C A C T G C A T G C T A G C T A G T G A C A C G T A C G T A C G T A C G T A C G T