Information for 2-GGAARGGCCTATW (Motif 4)

A C T G A C T G C G T A C T G A C T A G A C T G A C T G A G T C A G T C A C G T C G T A A C G T C G T A
Reverse Opposite:
C G A T C G T A C G A T C G T A C T A G A C T G A G T C G T A C G A C T A G C T A C G T A G T C A G T C
p-value:1e-11
log p-value:-2.759e+01
Information Content per bp:1.907
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif2.50%
Number of Background Sequences with motif6.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets54.0 +/- 22.2bp
Average Position of motif in Background41.6 +/- 17.3bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:1
Score:0.63
Offset:4
Orientation:forward strand
Alignment:GGAARGGCCTATW
----AGGCCTAG-
 A C T G A C T G C G T A C T G A C T A G A C T G A C T G A G T C A G T C A C G T C G T A A C G T C G T A
A C G T A C G T A C G T A C G T T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.62
Offset:4
Orientation:forward strand
Alignment:GGAARGGCCTATW
----AGGCCTNG-
 A C T G A C T G C G T A C T G A C T A G A C T G A C T G A G T C A G T C A C G T C G T A A C G T C G T A
A C G T A C G T A C G T A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G A C G T

REL/MA0101.1/Jaspar

Match Rank:3
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GGAARGGCCTATW
GGAAANCCCC---
 A C T G A C T G C G T A C T G A C T A G A C T G A C T G A G T C A G T C A C G T C G T A A C G T C G T A
A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C A C G T A C G T A C G T

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GGAARGGCCTATW
TGGAACAGMA----
 A C G T A C T G A C T G C G T A C T G A C T A G A C T G A C T G A G T C A G T C A C G T C G T A A C G T C G T A
C A G T A C T G T C A G T G C A G C T A A T G C T C G A A T C G G T C A T G C A A C G T A C G T A C G T A C G T

ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---GGAARGGCCTATW
TGGGGAAGGGCM----
 A C G T A C G T A C G T A C T G A C T G C G T A C T G A C T A G A C T G A C T G A G T C A G T C A C G T C G T A A C G T C G T A
G A C T C T A G C T A G C T A G A C T G T C G A C T G A C T A G C T A G C T A G G T A C G T C A A C G T A C G T A C G T A C G T

RELA/MA0107.1/Jaspar

Match Rank:6
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GGAARGGCCTATW
GGAAATTCCC---
 A C T G A C T G C G T A C T G A C T A G A C T G A C T G A G T C A G T C A C G T C G T A A C G T C G T A
A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C A C G T A C G T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:7
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---GGAARGGCCTATW
GGGGCCGAGGCCTG--
 A C G T A C G T A C G T A C T G A C T G C G T A C T G A C T A G A C T G A C T G A G T C A G T C A C G T C G T A A C G T C G T A
A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G A C G T A C G T

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:8
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GGAARGGCCTATW
GGGAAATCCCCN--
 A C G T A C T G A C T G C G T A C T G A C T A G A C T G A C T G A G T C A G T C A C G T C G T A A C G T C G T A
C A T G C T A G C T A G C T G A G C T A C G T A A G C T G A T C G T A C G T A C G T A C G C A T A C G T A C G T

MF0003.1_REL_class/Jaspar

Match Rank:9
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:GGAARGGCCTATW
GGAAATCCCC---
 A C T G A C T G C G T A C T G A C T A G A C T G A C T G A G T C A G T C A C G T C G T A A C G T C G T A
C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C A C G T A C G T A C G T

Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)

Match Rank:10
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----GGAARGGCCTATW
NDCAGGAARTNN-----
 A C G T A C G T A C G T A C G T A C T G A C T G C G T A C T G A C T A G A C T G A C T G A G T C A G T C A C G T C G T A A C G T C G T A
T G C A C T G A T A G C G T C A A C T G A C T G C G T A G C T A T C A G G A C T T C A G T A C G A C G T A C G T A C G T A C G T A C G T