Information for 7-TAACCATGGATTA (Motif 6)

C G A T G T C A C G T A A G T C T G A C C T G A G C A T A C T G T A C G T C G A C A G T C G A T C T G A
Reverse Opposite:
G A C T G C T A G T C A A G C T A T G C A G T C C G T A A G C T A C T G C T A G C G A T A C G T G C T A
p-value:1e-14
log p-value:-3.409e+01
Information Content per bp:1.696
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif2.10%
Number of Background Sequences with motif76.3
Percentage of Background Sequences with motif0.16%
Average Position of motif in Targets48.4 +/- 27.5bp
Average Position of motif in Background52.0 +/- 29.4bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:1
Score:0.67
Offset:5
Orientation:reverse strand
Alignment:TAACCATGGATTA--
-----VRGGATTARN
 C G A T G T C A C G T A A G T C T G A C C T G A G C A T A C T G T A C G T C G A C A G T C G A T C T G A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A C T A G C T A G C T A G G T C A A C G T C G A T C G T A C T G A T A G C

Pitx1/MA0682.1/Jaspar

Match Rank:2
Score:0.67
Offset:6
Orientation:reverse strand
Alignment:TAACCATGGATTA-
------GGGATTAA
 C G A T G T C A C G T A A G T C T G A C C T G A G C A T A C T G T A C G T C G A C A G T C G A T C T G A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A T G C T A G C T A G G T C A C G A T A G C T C G T A C T G A

GSC/MA0648.1/Jaspar

Match Rank:3
Score:0.67
Offset:5
Orientation:reverse strand
Alignment:TAACCATGGATTA--
-----NNGGATTAGN
 C G A T G T C A C G T A A G T C T G A C C T G A G C A T A C T G T A C G T C G A C A G T C G A T C T G A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T A G T A C G T C A G T C A G T G C A A C G T G A C T C T G A C T A G A T G C

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:4
Score:0.67
Offset:7
Orientation:reverse strand
Alignment:TAACCATGGATTA--
-------GGATTAGC
 C G A T G T C A C G T A A G T C T G A C C T G A G C A T A C T G T A C G T C G A C A G T C G A T C T G A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G T A C G T G C A C A G T G C A T C G T A C T A G T A G C

PITX3/MA0714.1/Jaspar

Match Rank:5
Score:0.66
Offset:6
Orientation:reverse strand
Alignment:TAACCATGGATTA--
------GGGATTANN
 C G A T G T C A C G T A A G T C T G A C C T G A G C A T A C T G T A C G T C G A C A G T C G A T C T G A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G T C A G C A T G G T C A A G C T G A C T C G T A C T G A A T C G

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:6
Score:0.66
Offset:5
Orientation:reverse strand
Alignment:TAACCATGGATTA
-----NGGGATTA
 C G A T G T C A C G T A A G T C T G A C C T G A G C A T A C T G T A C G T C G A C A G T C G A T C T G A
A C G T A C G T A C G T A C G T A C G T T G A C C T A G C T A G T C A G G T C A G C A T G A C T G C T A

RHOXF1/MA0719.1/Jaspar

Match Rank:7
Score:0.65
Offset:6
Orientation:reverse strand
Alignment:TAACCATGGATTA-
------NGGATTAN
 C G A T G T C A C G T A A G T C T G A C C T G A G C A T A C T G T A C G T C G A C A G T C G A T C T G A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A T G C T A G A C T G G T C A A C G T G A C T G C T A C G A T

PB0061.1_Sox11_1/Jaspar

Match Rank:8
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----TAACCATGGATTA
ATAAGAACAAAGGACTA
 A C G T A C G T A C G T A C G T C G A T G T C A C G T A A G T C T G A C C T G A G C A T A C T G T A C G T C G A C A G T C G A T C T G A
G C T A A C G T C G T A C G T A C T A G T C G A C G T A A G T C C G T A G T C A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

OTX2/MA0712.1/Jaspar

Match Rank:9
Score:0.65
Offset:6
Orientation:reverse strand
Alignment:TAACCATGGATTA-
------NGGATTAA
 C G A T G T C A C G T A A G T C T G A C C T G A G C A T A C T G T A C G T C G A C A G T C G A T C T G A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T G C A T C A G C T A G G T C A A C G T G C A T C G T A C T G A

GSC2/MA0891.1/Jaspar

Match Rank:10
Score:0.65
Offset:5
Orientation:reverse strand
Alignment:TAACCATGGATTA--
-----GNGGATTAGN
 C G A T G T C A C G T A A G T C T G A C C T G A G C A T A C T G T A C G T C G A C A G T C G A T C T G A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T A G T A G C T C A G C A T G T G C A C G A T C G A T C G T A C T A G A C T G