Information for 4-GAGGGCGGAGTTA (Motif 7)

A C T G C G T A A C T G A C T G A C T G A G T C A T C G A C T G C G T A A C T G A C G T A C G T C G T A
Reverse Opposite:
A C G T C G T A C G T A G T A C A C G T A G T C A T G C C T A G A G T C A G T C A G T C A C G T A G T C
p-value:1e-8
log p-value:-1.850e+01
Information Content per bp:1.946
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif1.85%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets27.8 +/- 11.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:1
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-GAGGGCGGAGTTA
RGKGGGCGGAGC--
 A C G T A C T G C G T A A C T G A C T G A C T G A G T C A T C G A C T G C G T A A C T G A C G T A C G T C G T A
C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C A C G T A C G T

KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer

Match Rank:2
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--GAGGGCGGAGTTA
NNVDGGGYGGGGCYN
 A C G T A C G T A C T G C G T A A C T G A C T G A C T G A G T C A T C G A C T G C G T A A C T G A C G T A C G T C G T A
T A C G T G A C T C A G C T G A A C T G A C T G A C T G A G C T A C T G A C T G C T A G A C T G A G T C A G T C C T G A

POL003.1_GC-box/Jaspar

Match Rank:3
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GAGGGCGGAGTTA
AGGGGGCGGGGCTG
 A C G T A C T G C G T A A C T G A C T G A C T G A G T C A T C G A C T G C G T A A C T G A C G T A C G T C G T A
C G T A C T A G C A T G T C A G A C T G C T A G G T A C C T A G A C T G C T A G C A T G A G T C A G C T C A T G

PB0039.1_Klf7_1/Jaspar

Match Rank:4
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GAGGGCGGAGTTA-
NNAGGGGCGGGGTNNA
 A C G T A C G T A C T G C G T A A C T G A C T G A C T G A G T C A T C G A C T G C G T A A C T G A C G T A C G T C G T A A C G T
G C T A C G A T C T G A C T A G C T A G A C T G A C T G G A T C C A T G A C T G C A T G C A T G A G C T G A T C T C A G C G T A

SP1/MA0079.3/Jaspar

Match Rank:5
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GAGGGCGGAGTTA
GGGGGCGGGGC--
 A C T G C G T A A C T G A C T G A C T G A G T C A T C G A C T G C G T A A C T G A C G T A C G T C G T A
T C A G C T A G C T A G A C T G A C T G G T A C C T A G A C T G C T A G T C A G T G A C A C G T A C G T

ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.60
Offset:-8
Orientation:forward strand
Alignment:--------GAGGGCGGAGTTA
SMCAGTCWGAKGGAGGAGGC-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C T G A C T G A C T G A G T C A T C G A C T G C G T A A C T G A C G T A C G T C G T A
A T C G T G A C A T G C C T G A T C A G G A C T A G T C C G A T T C A G T C G A C A T G C T A G C T A G C G T A C T A G C T A G C T G A C T A G C T A G A T G C A C G T

EGR1/MA0162.2/Jaspar

Match Rank:7
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---GAGGGCGGAGTTA
GGCGGGGGCGGGGG--
 A C G T A C G T A C G T A C T G C G T A A C T G A C T G A C T G A G T C A T C G A C T G C G T A A C T G A C G T A C G T C G T A
A C T G T A C G G T A C C T A G C A T G T C A G C T A G A C T G G A T C C T A G C A T G T C A G C T A G T A C G A C G T A C G T

PB0010.1_Egr1_1/Jaspar

Match Rank:8
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----GAGGGCGGAGTTA
ANTGCGGGGGCGGN----
 A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C T G A C T G A C T G A G T C A T C G A C T G C G T A A C T G A C G T A C G T C G T A
G T C A C T G A G C A T T C A G T G A C C A T G A C T G C T A G A T C G A C T G A G T C C T A G C A T G C T G A A C G T A C G T A C G T A C G T

KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GAGGGCGGAGTTA
RGKGGGCGKGGC--
 A C G T A C T G C G T A A C T G A C T G A C T G A G T C A T C G A C T G C G T A A C T G A C G T A C G T C G T A
C T A G T C A G C A G T T C A G A C T G A C T G G A T C C T A G A C T G C T A G T C A G A T G C A C G T A C G T

PB0107.1_Ascl2_2/Jaspar

Match Rank:10
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GAGGGCGGAGTTA-
NATNGGGNGGGGANAN
 A C G T A C G T A C T G C G T A A C T G A C T G A C T G A G T C A T C G A C T G C G T A A C T G A C G T A C G T C G T A A C G T
C T G A T G C A G A C T T C G A C T A G C T A G T C A G G A T C A C T G C A T G A T C G C A T G G C T A A C G T C T G A T A C G