Information for 4-CGTCACGTGA (Motif 6)

A G T C A T C G G C A T T A G C T C G A A T G C C T A G C A G T A T C G T C G A
Reverse Opposite:
A G C T T A G C G T C A G A T C A T C G A G C T A T C G C G T A T A G C T C A G
p-value:1e-8
log p-value:-1.968e+01
Information Content per bp:1.694
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif11.73%
Number of Background Sequences with motif907.1
Percentage of Background Sequences with motif2.15%
Average Position of motif in Targets61.0 +/- 23.0bp
Average Position of motif in Background47.6 +/- 43.6bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BHLHE41/MA0636.1/Jaspar

Match Rank:1
Score:0.91
Offset:1
Orientation:reverse strand
Alignment:CGTCACGTGA-
-GTCACGTGAC
 A G T C A T C G G C A T T A G C T C G A A T G C C T A G C A G T A T C G T C G A A C G T
A C G T T C A G C A G T A G T C C G T A A G T C C T A G A G C T A T C G G T C A A G T C

E-box(bHLH)/Promoter/Homer

Match Rank:2
Score:0.91
Offset:-2
Orientation:forward strand
Alignment:--CGTCACGTGA
CCGGTCACGTGA
 A C G T A C G T A G T C A T C G G C A T T A G C T C G A A T G C C T A G C A G T A T C G T C G A
A T G C A T G C A T C G T A C G A G C T A G T C G C T A A G T C T C A G G A C T A C T G T C G A

TFE3(bHLH)/MEF-TFE3-ChIP-Seq(GSE75757)/Homer

Match Rank:3
Score:0.90
Offset:1
Orientation:forward strand
Alignment:CGTCACGTGA---
-GTCACGTGACYV
 A G T C A T C G G C A T T A G C T C G A A T G C C T A G C A G T A T C G T C G A A C G T A C G T A C G T
A C G T T C A G A G C T A T G C C G T A A G T C T C A G A C G T A T C G T C G A A G T C G A T C T G A C

USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.89
Offset:0
Orientation:forward strand
Alignment:CGTCACGTGA
GGTCACGTGA
 A G T C A T C G G C A T T A G C T C G A A T G C C T A G C A G T A T C G T C G A
T A C G T C A G A G C T A T G C C G T A A G T C T C A G A C G T A C T G T C G A

SREBF2(var.2)/MA0828.1/Jaspar

Match Rank:5
Score:0.89
Offset:1
Orientation:reverse strand
Alignment:CGTCACGTGA-
-GTCACGTGAT
 A G T C A T C G G C A T T A G C T C G A A T G C C T A G C A G T A T C G T C G A A C G T
A C G T T C A G G C A T T A G C C T G A A T G C T A C G G A C T A T C G C G T A A G C T

Srebf1(var.2)/MA0829.1/Jaspar

Match Rank:6
Score:0.89
Offset:1
Orientation:reverse strand
Alignment:CGTCACGTGA-
-GTCACGTGAT
 A G T C A T C G G C A T T A G C T C G A A T G C C T A G C A G T A T C G T C G A A C G T
A C G T T C A G C G A T A T G C C T G A A T G C T A C G G A C T A C T G C G T A A G C T

Arntl/MA0603.1/Jaspar

Match Rank:7
Score:0.88
Offset:0
Orientation:forward strand
Alignment:CGTCACGTGA
GGTCACGTGC
 A G T C A T C G G C A T T A G C T C G A A T G C C T A G C A G T A T C G T C G A
C A T G T C A G C A G T G T A C G C T A A G T C C T A G G A C T C A T G G A T C

TFEB/MA0692.1/Jaspar

Match Rank:8
Score:0.88
Offset:1
Orientation:reverse strand
Alignment:CGTCACGTGA-
-GTCACGTGAT
 A G T C A T C G G C A T T A G C T C G A A T G C C T A G C A G T A T C G T C G A A C G T
A C G T T C A G A C G T T G A C C G T A A G T C T C A G C A G T C A T G T C G A A G C T

TFE3/MA0831.1/Jaspar

Match Rank:9
Score:0.87
Offset:1
Orientation:reverse strand
Alignment:CGTCACGTGA-
-GTCACGTGNT
 A G T C A T C G G C A T T A G C T C G A A T G C C T A G C A G T A T C G T C G A A C G T
A C G T C T A G A C G T T G A C C G T A A G T C T C A G C G A T A T C G T C G A A G C T

PB0007.1_Bhlhb2_1/Jaspar

Match Rank:10
Score:0.87
Offset:-5
Orientation:reverse strand
Alignment:-----CGTCACGTGA-------
NTNNTNGTCACGTGACNNNTNC
 A C G T A C G T A C G T A C G T A C G T A G T C A T C G G C A T T A G C T C G A A T G C C T A G C A G T A T C G T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T A G G C A T C T G A A G C T C A G T T C A G T A C G C A G T G T A C C T G A A G T C T C A G G A C T A C T G G T C A G A T C A G C T T G A C G C A T C G A T G A T C G A T C