Information for 3-AGCCCTAGATGKC (Motif 4)

C G T A A C T G A T G C A G T C A T G C C A G T C T G A C T A G C T G A A C G T A C T G A C T G A G T C
Reverse Opposite:
C T A G G T A C A G T C C G T A A G C T A G T C G A C T G C T A A T C G A C T G A T C G A G T C A C G T
p-value:1e-9
log p-value:-2.131e+01
Information Content per bp:1.778
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif3.70%
Number of Background Sequences with motif23.7
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets52.8 +/- 29.5bp
Average Position of motif in Background57.9 +/- 30.4bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.62
Offset:0
Orientation:forward strand
Alignment:AGCCCTAGATGKC
AGGCCTNG-----
 C G T A A C T G A T G C A G T C A T G C C A G T C T G A C T A G C T G A A C G T A C T G A C T G A G T C
C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G A C G T A C G T A C G T A C G T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:2
Score:0.60
Offset:0
Orientation:forward strand
Alignment:AGCCCTAGATGKC
AGGCCTAG-----
 C G T A A C T G A T G C A G T C A T G C C A G T C T G A C T A G C T G A A C G T A C T G A C T G A G T C
T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G A C G T A C G T A C G T A C G T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:3
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-AGCCCTAGATGKC
CAGGCCNNGGCCNN
 A C G T C G T A A C T G A T G C A G T C A T G C C A G T C T G A C T A G C T G A A C G T A C T G A C T G A G T C
A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

YY1/MA0095.2/Jaspar

Match Rank:4
Score:0.57
Offset:4
Orientation:forward strand
Alignment:AGCCCTAGATGKC---
----CAAGATGGCGGC
 C G T A A C T G A T G C A G T C A T G C C A G T C T G A C T A G C T G A A C G T A C T G A C T G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C

POL010.1_DCE_S_III/Jaspar

Match Rank:5
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-AGCCCTAGATGKC
CAGCC---------
 A C G T C G T A A C T G A T G C A G T C A T G C C A G T C T G A C T A G C T G A A C G T A C T G A C T G A G T C
T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

YY1(Zf)/Promoter/Homer

Match Rank:6
Score:0.54
Offset:4
Orientation:forward strand
Alignment:AGCCCTAGATGKC---
----CAAGATGGCGGC
 C G T A A C T G A T G C A G T C A T G C C A G T C T G A C T A G C T G A A C G T A C T G A C T G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-AGCCCTAGATGKC
GAGSCCGAGC----
 A C G T C G T A A C T G A T G C A G T C A T G C C A G T C T G A C T A G C T G A A C G T A C T G A C T G A G T C
A C T G C G T A A C T G A T G C T G A C G A T C A T C G T G C A A C T G A G T C A C G T A C G T A C G T A C G T

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:8
Score:0.53
Offset:0
Orientation:forward strand
Alignment:AGCCCTAGATGKC----
AAGGCCAGATGGTCCGG
 C G T A A C T G A T G C A G T C A T G C C A G T C T G A C T A G C T G A A C G T A C T G A C T G A G T C A C G T A C G T A C G T A C G T
G C T A T C G A C T A G C A T G T A G C G T A C C T G A A C T G T C G A C G A T A C T G C A T G A G C T G A T C A T G C A T C G T C A G

ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---AGCCCTAGATGKC
ARGAGGMCAAAATGW-
 A C G T A C G T A C G T C G T A A C T G A T G C A G T C A T G C C A G T C T G A C T A G C T G A A C G T A C T G A C T G A G T C
T G C A C T A G C T A G C T G A C A T G A C T G T G C A G A T C G T C A T G C A G T C A G T C A A G C T C T A G G C A T A C G T

Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:10
Score:0.51
Offset:4
Orientation:reverse strand
Alignment:AGCCCTAGATGKC-
----GTTAATGGCC
 C G T A A C T G A T G C A G T C A T G C C A G T C T G A C T A G C T G A A C G T A C T G A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A T C G A G C T C A G T T C G A C T G A C G A T C A T G C T A G A T G C G A T C