Information for 6-CAATGCAAAT (Motif 14)

A T G C C T G A G T C A A G C T C A T G A G T C C G T A T G C A G T C A A C G T
Reverse Opposite:
C G T A C A G T A C G T A C G T A C T G G T A C C T G A A C G T A G C T A T C G
p-value:1e-5
log p-value:-1.336e+01
Information Content per bp:1.771
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif4.94%
Number of Background Sequences with motif205.3
Percentage of Background Sequences with motif0.49%
Average Position of motif in Targets61.1 +/- 27.6bp
Average Position of motif in Background50.4 +/- 35.7bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POU2F2/MA0507.1/Jaspar

Match Rank:1
Score:0.75
Offset:0
Orientation:reverse strand
Alignment:CAATGCAAAT---
ATATGCAAATNNN
 A T G C C T G A G T C A A G C T C A T G A G T C C G T A T G C A G T C A A C G T A C G T A C G T A C G T
C G T A G A C T C T G A A C G T C T A G G A T C C G T A C G T A C G T A C G A T C A T G G T C A C T G A

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:2
Score:0.73
Offset:1
Orientation:forward strand
Alignment:CAATGCAAAT---
-WATGCAAATGAG
 A T G C C T G A G T C A A G C T C A T G A G T C C G T A T G C A G T C A A C G T A C G T A C G T A C G T
A C G T G C A T C G T A C G A T A C T G A G T C G C T A C T G A C G T A C A G T A C T G C G T A T C A G

PH0144.1_Pou2f2/Jaspar

Match Rank:3
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--CAATGCAAAT----
TTGTATGCAAATTAGA
 A C G T A C G T A T G C C T G A G T C A A G C T C A T G A G T C C G T A T G C A G T C A A C G T A C G T A C G T A C G T A C G T
A G C T G C A T C A T G G C A T C G T A A G C T C A T G A G T C C G T A C G T A C G T A C G A T C A G T G C T A C T A G T G C A

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.72
Offset:0
Orientation:forward strand
Alignment:CAATGCAAAT
ATATGCAAAT
 A T G C C T G A G T C A A G C T C A T G A G T C C G T A T G C A G T C A A C G T
G T C A G C A T G C T A C A G T C T A G G A T C C G T A C T G A C G T A C G A T

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:CAATGCAAAT
TTATGCAAAT
 A T G C C T G A G T C A A G C T C A T G A G T C C G T A T G C A G T C A A C G T
C G A T G C A T C T G A A C G T A C T G A G T C C G T A C T G A C G T A C G A T

Pou2f3/MA0627.1/Jaspar

Match Rank:6
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--CAATGCAAAT----
TTGTATGCAAATTAGA
 A C G T A C G T A T G C C T G A G T C A A G C T C A T G A G T C C G T A T G C A G T C A A C G T A C G T A C G T A C G T A C G T
A C G T G C A T C A T G G A C T C G T A A G C T A C T G A G T C C G T A C G T A C G T A C A G T A C G T G T C A C T A G T G C A

PH0145.1_Pou2f3/Jaspar

Match Rank:7
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--CAATGCAAAT----
TTGTATGCAAATTAGA
 A C G T A C G T A T G C C T G A G T C A A G C T C A T G A G T C C G T A T G C A G T C A A C G T A C G T A C G T A C G T A C G T
A C G T G C A T C A T G G A C T C G T A A G C T A C T G A G T C C G T A C G T A C G T A C A G T A C G T G T C A C T A G T G C A

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:8
Score:0.70
Offset:1
Orientation:forward strand
Alignment:CAATGCAAAT---
-TATGCWAATBAV
 A T G C C T G A G T C A A G C T C A T G A G T C C G T A T G C A G T C A A C G T A C G T A C G T A C G T
A C G T G A C T C G T A A C G T A C T G A G T C C G T A C T G A C G T A C A G T A C G T G T C A T C A G

POU5F1B/MA0792.1/Jaspar

Match Rank:9
Score:0.70
Offset:1
Orientation:forward strand
Alignment:CAATGCAAAT
-TATGCAAAT
 A T G C C T G A G T C A A G C T C A T G A G T C C G T A T G C A G T C A A C G T
A C G T G A C T C G T A A G C T C A T G A G T C C G T A C G T A C G T A C G A T

POU3F4/MA0789.1/Jaspar

Match Rank:10
Score:0.69
Offset:1
Orientation:forward strand
Alignment:CAATGCAAAT
-TATGCAAAT
 A T G C C T G A G T C A A G C T C A T G A G T C C G T A T G C A G T C A A C G T
A C G T G C A T C T G A G A C T C A T G A G T C C G T A G C T A C G T A C G A T