Information for 5-ARACCGGAAR (Motif 11)

C G T A C T A G C T G A T A G C T A G C C T A G A C T G C T G A G T C A C T A G
Reverse Opposite:
A G T C A C G T A G C T A G T C A G T C A T C G A T C G G A C T A G T C A C G T
p-value:1e-6
log p-value:-1.559e+01
Information Content per bp:1.700
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif9.26%
Number of Background Sequences with motif725.7
Percentage of Background Sequences with motif1.72%
Average Position of motif in Targets61.1 +/- 25.3bp
Average Position of motif in Background52.1 +/- 35.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0001.1_ETS_class/Jaspar

Match Rank:1
Score:0.78
Offset:2
Orientation:forward strand
Alignment:ARACCGGAAR
--ACCGGAAG
 C G T A C T A G C T G A T A G C T A G C C T A G A C T G C T G A G T C A C T A G
A C G T A C G T C T G A T A G C T G A C C A T G C T A G C T G A G C T A T C A G

PB0020.1_Gabpa_1/Jaspar

Match Rank:2
Score:0.76
Offset:-2
Orientation:forward strand
Alignment:--ARACCGGAAR-----
CAATACCGGAAGTGTAA
 A C G T A C G T C G T A C T A G C T G A T A G C T A G C C T A G A C T G C T G A G T C A C T A G A C G T A C G T A C G T A C G T A C G T
G T A C T G A C G C T A G C A T C T G A T A G C T G A C A C T G A C T G C G T A C G T A T C A G G A C T C A T G G A C T C G T A T C G A

ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer

Match Rank:3
Score:0.76
Offset:1
Orientation:forward strand
Alignment:ARACCGGAAR-
-AACCGGAAGT
 C G T A C T A G C T G A T A G C T A G C C T A G A C T G C T G A G T C A C T A G A C G T
A C G T T C G A C T G A T A G C T G A C T C A G T C A G C G T A C G T A T C A G A G C T

FLI1/MA0475.2/Jaspar

Match Rank:4
Score:0.75
Offset:2
Orientation:forward strand
Alignment:ARACCGGAAR--
--ACCGGAAGTG
 C G T A C T A G C T G A T A G C T A G C C T A G A C T G C T G A G T C A C T A G A C G T A C G T
A C G T A C G T C T G A T G A C T G A C C T A G A C T G T G C A G C T A T C A G A G C T T C A G

ERG/MA0474.2/Jaspar

Match Rank:5
Score:0.75
Offset:2
Orientation:forward strand
Alignment:ARACCGGAAR--
--ACCGGAAGTG
 C G T A C T A G C T G A T A G C T A G C C T A G A C T G C T G A G T C A C T A G A C G T A C G T
A C G T A C G T C G T A T G A C T G A C C T A G A C T G G T C A G C T A T C A G A G C T T A C G

ETV2/MA0762.1/Jaspar

Match Rank:6
Score:0.75
Offset:1
Orientation:forward strand
Alignment:ARACCGGAAR--
-AACCGGAAATA
 C G T A C T A G C T G A T A G C T A G C C T A G A C T G C T G A G T C A C T A G A C G T A C G T
A C G T C T G A T C G A T A G C T G A C A C T G A C T G C G T A G C T A T C G A A G C T C T G A

Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.75
Offset:2
Orientation:reverse strand
Alignment:ARACCGGAAR--
--RCCGGAAGTD
 C G T A C T A G C T G A T A G C T A G C C T A G A C T G C T G A G T C A C T A G A C G T A C G T
A C G T A C G T C T G A T A G C T G A C T A C G T C A G G C T A G C T A T C A G A G C T C T A G

ETS1/MA0098.3/Jaspar

Match Rank:8
Score:0.75
Offset:2
Orientation:forward strand
Alignment:ARACCGGAAR--
--ACCGGAAGTG
 C G T A C T A G C T G A T A G C T A G C C T A G A C T G C T G A G T C A C T A G A C G T A C G T
A C G T A C G T C T G A T A G C T G A C A T C G A C T G C G T A C G T A T C A G A G C T T C A G

GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer

Match Rank:9
Score:0.75
Offset:1
Orientation:forward strand
Alignment:ARACCGGAAR-
-NACCGGAAGT
 C G T A C T A G C T G A T A G C T A G C C T A G A C T G C T G A G T C A C T A G A C G T
A C G T T C G A T C G A T A G C G T A C T C A G T A C G C G T A C G T A T C A G A G C T

FEV/MA0156.2/Jaspar

Match Rank:10
Score:0.75
Offset:2
Orientation:forward strand
Alignment:ARACCGGAAR--
--ACCGGAAGTG
 C G T A C T A G C T G A T A G C T A G C C T A G A C T G C T G A G T C A C T A G A C G T A C G T
A C G T A C G T C G T A T G A C T G A C C T A G C A T G G C T A G C T A T C A G A G C T C T A G