Information for 2-CKSYGRTTGGCTG (Motif 4)

G T A C A C G T T A G C A G T C T A C G C T A G A C G T A C G T A C T G A C T G A G T C A C G T C T A G
Reverse Opposite:
G A T C T G C A C T A G A G T C G T A C G T C A C G T A G A T C A T G C T C A G A T C G T G C A C A T G
p-value:1e-17
log p-value:-3.988e+01
Information Content per bp:1.676
Number of Target Sequences with motif47.0
Percentage of Target Sequences with motif5.33%
Number of Background Sequences with motif524.8
Percentage of Background Sequences with motif1.11%
Average Position of motif in Targets55.2 +/- 28.0bp
Average Position of motif in Background48.0 +/- 30.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFY(CCAAT)/Promoter/Homer

Match Rank:1
Score:0.77
Offset:2
Orientation:reverse strand
Alignment:CKSYGRTTGGCTG
--CCGATTGGCT-
 G T A C A C G T T A G C A G T C T A C G C T A G A C G T A C G T A C T G A C T G A G T C A C G T C T A G
A C G T A C G T A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T A C G T

NFYB/MA0502.1/Jaspar

Match Rank:2
Score:0.75
Offset:2
Orientation:reverse strand
Alignment:CKSYGRTTGGCTG----
--CTGATTGGTCNATTT
 G T A C A C G T T A G C A G T C T A C G C T A G A C G T A C G T A C T G A C T G A G T C A C G T C T A G A C G T A C G T A C G T A C G T
A C G T A C G T A T G C A G C T A T C G C G T A A G C T A C G T A C T G A C T G G A C T A G T C T A G C T C G A C A G T C A G T A G C T

POL004.1_CCAAT-box/Jaspar

Match Rank:3
Score:0.74
Offset:3
Orientation:reverse strand
Alignment:CKSYGRTTGGCTG--
---TGATTGGCTANN
 G T A C A C G T T A G C A G T C T A C G C T A G A C G T A C G T A C T G A C T G A G T C A C G T C T A G A C G T A C G T
A C G T A C G T A C G T A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T

NFYA/MA0060.2/Jaspar

Match Rank:4
Score:0.70
Offset:-4
Orientation:forward strand
Alignment:----CKSYGRTTGGCTG-
AGAGTGCTGATTGGTCCA
 A C G T A C G T A C G T A C G T G T A C A C G T T A G C A G T C T A C G C T A G A C G T A C G T A C T G A C T G A G T C A C G T C T A G A C G T
G C T A C A T G T G C A T A C G G A C T A C T G A G T C A G C T A T C G C T G A A G C T C G A T T C A G T A C G G A C T A G T C T A G C T C G A

NFIC/MA0161.1/Jaspar

Match Rank:5
Score:0.69
Offset:6
Orientation:forward strand
Alignment:CKSYGRTTGGCTG
------TTGGCA-
 G T A C A C G T T A G C A G T C T A C G C T A G A C G T A C G T A C T G A C T G A G T C A C G T C T A G
A C G T A C G T A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T

NFIX/MA0671.1/Jaspar

Match Rank:6
Score:0.66
Offset:5
Orientation:reverse strand
Alignment:CKSYGRTTGGCTG-
-----NTTGGCANN
 G T A C A C G T T A G C A G T C T A C G C T A G A C G T A C G T A C T G A C T G A G T C A C G T C T A G A C G T
A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

PB0164.1_Smad3_2/Jaspar

Match Rank:7
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:CKSYGRTTGGCTG------
--NAGANTGGCGGGGNGNA
 G T A C A C G T T A G C A G T C T A C G C T A G A C G T A C G T A C T G A C T G A G T C A C G T C T A G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A

PB0150.1_Mybl1_2/Jaspar

Match Rank:8
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CKSYGRTTGGCTG
CACGGCAGTTGGTNN
 A C G T A C G T G T A C A C G T T A G C A G T C T A C G C T A G A C G T A C G T A C T G A C T G A G T C A C G T C T A G
T G A C C G T A A G T C C A T G C T A G A G T C T C G A A C T G A C G T C A G T C T A G C T A G A C G T T A G C T A C G

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:9
Score:0.60
Offset:6
Orientation:forward strand
Alignment:CKSYGRTTGGCTG-
------TWGTCTGV
 G T A C A C G T T A G C A G T C T A C G C T A G A C G T A C G T A C T G A C T G A G T C A C G T C T A G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G

PH0109.1_Nkx1-1/Jaspar

Match Rank:10
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CKSYGRTTGGCTG--
TGCGCTAATTAGTGGGA
 A C G T A C G T G T A C A C G T T A G C A G T C T A C G C T A G A C G T A C G T A C T G A C T G A G T C A C G T C T A G A C G T A C G T
C G A T T A C G G T A C T C A G A G T C G A C T G T C A C G T A C G A T A C G T C T G A T C A G A G C T C A T G T A C G A C T G T C G A