Information for 20-GTGCATGCATGCA (Motif 30)

T C A G A C G T A C T G A G T C C T G A A C G T A C T G A G T C C G T A A C G T A C T G A G T C G T C A
Reverse Opposite:
A C G T A C T G A G T C C G T A A C G T A C T G A G T C C G T A A G C T A C T G A G T C G T C A A G T C
p-value:1e-3
log p-value:-8.664e+00
Information Content per bp:1.944
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.23%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets48.0 +/- 5.3bp
Average Position of motif in Background6.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:1
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:GTGCATGCATGCA----
--SCAGYCADGCATGAC
 T C A G A C G T A C T G A G T C C T G A A C G T A C T G A G T C C G T A A C G T A C T G A G T C G T C A A C G T A C G T A C G T A C G T
A C G T A C G T A T C G G T A C C G T A A T C G A G C T A T G C C G T A C T A G A T C G A G T C T C G A C A G T T C A G T C G A T G A C

PB0170.1_Sox17_2/Jaspar

Match Rank:2
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GTGCATGCATGCA--
GACCACATTCATACAAT
 A C G T A C G T T C A G A C G T A C T G A G T C C T G A A C G T A C T G A G T C C G T A A C G T A C T G A G T C G T C A A C G T A C G T
T A C G G C T A A G T C G T A C G T C A A G T C G C T A A G C T C G A T T G A C C T G A A G C T T C G A G A T C T C G A C G T A C G A T

PB0028.1_Hbp1_1/Jaspar

Match Rank:3
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GTGCATGCATGCA----
-NNCATTCATTCATNNN
 T C A G A C G T A C T G A G T C C T G A A C G T A C T G A G T C C G T A A C G T A C T G A G T C G T C A A C G T A C G T A C G T A C G T
A C G T T C G A G A C T G T A C C G T A A G C T G A C T T G A C C G T A C G A T G C A T A T G C C G T A C G A T G C T A A C T G C G A T

PB0178.1_Sox8_2/Jaspar

Match Rank:4
Score:0.56
Offset:2
Orientation:forward strand
Alignment:GTGCATGCATGCA---
--ACATTCATGACACG
 T C A G A C G T A C T G A G T C C T G A A C G T A C T G A G T C C G T A A C G T A C T G A G T C G T C A A C G T A C G T A C G T
A C G T A C G T C G T A G A T C G C T A A C G T C G A T G A T C T C G A A C G T C T A G G C T A G T A C G T C A A T G C T A C G

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:5
Score:0.56
Offset:4
Orientation:forward strand
Alignment:GTGCATGCATGCA-
----TBGCACGCAA
 T C A G A C G T A C T G A G T C C T G A A C G T A C T G A G T C C G T A A C G T A C T G A G T C G T C A A C G T
A C G T A C G T A C G T A C G T G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:6
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:GTGCATGCATGCA
GHATATKCAT---
 T C A G A C G T A C T G A G T C C T G A A C G T A C T G A G T C C G T A A C G T A C T G A G T C G T C A
C T A G G T A C C G T A G A C T C T G A C G A T C A T G G A T C C G T A C G A T A C G T A C G T A C G T

PB0171.1_Sox18_2/Jaspar

Match Rank:7
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---GTGCATGCATGCA
GGACTGAATTCATGCC
 A C G T A C G T A C G T T C A G A C G T A C T G A G T C C T G A A C G T A C T G A G T C C G T A A C G T A C T G A G T C G T C A
C T A G A C T G C T G A A T G C A G C T C T A G G T C A C T G A G A C T C A G T G A T C T C G A C G A T C T A G G T A C T G A C

NRF(NRF)/Promoter/Homer

Match Rank:8
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:GTGCATGCATGCA
GCGCATGCGCAC-
 T C A G A C G T A C T G A G T C C T G A A C G T A C T G A G T C C G T A A C G T A C T G A G T C G T C A
A C T G A G T C A C T G A G T C C G T A A C G T A C T G A G T C A C T G A G T C C T G A T A G C A C G T

GCM1/MA0646.1/Jaspar

Match Rank:9
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:GTGCATGCATGCA
GTACCCGCATN--
 T C A G A C G T A C T G A G T C C T G A A C G T A C T G A G T C C G T A A C G T A C T G A G T C G T C A
T A C G A G C T T C G A T A G C T G A C G T A C C A T G A G T C C G T A A G C T T C A G A C G T A C G T

p63(p53)/Keratinocyte-p63-ChIP-Seq(GSE17611)/Homer

Match Rank:10
Score:0.51
Offset:-7
Orientation:forward strand
Alignment:-------GTGCATGCATGCA
NNNGCATGTCNNGACATGCN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G A C G T A C T G A G T C C T G A A C G T A C T G A G T C C G T A A C G T A C T G A G T C G T C A
G T C A T C G A C T A G C T A G A G T C G T C A C G A T C T A G G A C T G A T C G A T C T C A G C T A G C T G A A G T C G C T A C A G T T C A G G A T C G A T C