Information for 15-GGAAATTCCC (Motif 27)

A C T G T A C G C G T A G T C A C G T A C G A T A G C T T G A C A G T C A G T C
Reverse Opposite:
A C T G A C T G A C T G T C G A C G T A C G A T C A G T A C G T A T G C G T A C
p-value:1e-7
log p-value:-1.817e+01
Information Content per bp:1.785
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif2.15%
Number of Background Sequences with motif197.8
Percentage of Background Sequences with motif0.42%
Average Position of motif in Targets44.6 +/- 30.1bp
Average Position of motif in Background45.9 +/- 28.8bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:1
Score:0.95
Offset:0
Orientation:forward strand
Alignment:GGAAATTCCC
GGAAATTCCC
 A C T G T A C G C G T A G T C A C G T A C G A T A G C T T G A C A G T C A G T C
A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C

RELA/MA0107.1/Jaspar

Match Rank:2
Score:0.86
Offset:0
Orientation:reverse strand
Alignment:GGAAATTCCC
GGAAATTCCC
 A C T G T A C G C G T A G T C A C G T A C G A T A G C T T G A C A G T C A G T C
A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:3
Score:0.83
Offset:-1
Orientation:reverse strand
Alignment:-GGAAATTCCC-
GGGAAATCCCCN
 A C G T A C T G T A C G C G T A G T C A C G T A C G A T A G C T T G A C A G T C A G T C A C G T
C A T G C T A G C T A G C T G A G C T A C G T A A G C T G A T C G T A C G T A C G T A C G C A T

MF0003.1_REL_class/Jaspar

Match Rank:4
Score:0.82
Offset:0
Orientation:reverse strand
Alignment:GGAAATTCCC
GGAAATCCCC
 A C T G T A C G C G T A G T C A C G T A C G A T A G C T T G A C A G T C A G T C
C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C

REL/MA0101.1/Jaspar

Match Rank:5
Score:0.79
Offset:0
Orientation:reverse strand
Alignment:GGAAATTCCC
GGAAANCCCC
 A C T G T A C G C G T A G T C A C G T A C G A T A G C T T G A C A G T C A G T C
A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C

NFKB2/MA0778.1/Jaspar

Match Rank:6
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--GGAAATTCCC-
AGGGGAATCCCCT
 A C G T A C G T A C T G T A C G C G T A G T C A C G T A C G A T A G C T T G A C A G T C A G T C A C G T
T C G A C T A G C A T G C A T G C T A G C T G A C G T A A C G T G A T C G T A C G T A C A G T C A C G T

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:7
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----GGAAATTCCC
NACAGGAAAT----
 A C G T A C G T A C G T A C G T A C T G T A C G C G T A G T C A C G T A C G A T A G C T T G A C A G T C A G T C
T A G C C T G A T A G C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T A C G T A C G T A C G T

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:8
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GGAAATTCCC
GGGGGAATCCCC
 A C G T A C G T A C T G T A C G C G T A G T C A C G T A C G A T A G C T T G A C A G T C A G T C
T C A G C T A G C T A G C T A G T C A G T C G A C T G A C G A T A G T C G A T C A G T C T G A C

NFATC1/MA0624.1/Jaspar

Match Rank:9
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---GGAAATTCCC
NNTGGAAANN---
 A C G T A C G T A C G T A C T G T A C G C G T A G T C A C G T A C G A T A G C T T G A C A G T C A G T C
C G T A C T G A G A C T C T A G A C T G C T G A C T G A G C T A C G T A G C A T A C G T A C G T A C G T

PB0012.1_Elf3_1/Jaspar

Match Rank:10
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----GGAAATTCCC
AACAAGGAAGTAA--
 A C G T A C G T A C G T A C G T A C G T A C T G T A C G C G T A G T C A C G T A C G A T A G C T T G A C A G T C A G T C
C G A T C G T A G T A C T G C A T G C A C T A G C A T G C G T A G C T A T C A G G A C T C G T A T C G A A C G T A C G T