Information for 12-AGGTTAGAGG (Motif 23)

C G T A C A T G A C T G A G C T A G C T G T C A A C T G C G T A A C T G C T A G
Reverse Opposite:
A G T C A G T C A C G T A G T C C A G T C T G A T C G A G T A C G T A C A C G T
p-value:1e-8
log p-value:-1.982e+01
Information Content per bp:1.850
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.59%
Number of Background Sequences with motif88.5
Percentage of Background Sequences with motif0.19%
Average Position of motif in Targets56.2 +/- 31.1bp
Average Position of motif in Background49.5 +/- 24.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NR2C2/MA0504.1/Jaspar

Match Rank:1
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--AGGTTAGAGG---
AGGGGTCAGAGGTCA
 A C G T A C G T C G T A C A T G A C T G A G C T A G C T G T C A A C T G C G T A A C T G C T A G A C G T A C G T A C G T
T G C A T C A G T C A G A C T G C A T G C A G T A T G C C T G A C T A G C T G A C T A G C A T G A C G T A G T C C T G A

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:2
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-AGGTTAGAGG---
GAGGTCAAAGGTCA
 A C G T C G T A C A T G A C T G A G C T A G C T G T C A A C T G C G T A A C T G C T A G A C G T A C G T A C G T
T C A G C T G A C T A G C A T G A C G T A T G C C T G A C T G A C T G A C T A G C A T G A C G T A T G C C T G A

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:3
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:AGGTTAGAGG---
-GGTTAGAGACCT
 C G T A C A T G A C T G A G C T A G C T G T C A A C T G C G T A A C T G C T A G A C G T A C G T A C G T
A C G T C T A G T A C G C G A T A C G T C G T A T C A G C T G A T C A G G T C A T G A C A G T C G A C T

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:4
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--AGGTTAGAGG---
GTAGGGCAAAGGTCA
 A C G T A C G T C G T A C A T G A C T G A G C T A G C T G T C A A C T G C G T A A C T G C T A G A C G T A C G T A C G T
A T C G A G C T C T G A C T A G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:5
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-AGGTTAGAGG---
TAGGGCAAAGGTCA
 A C G T C G T A C A T G A C T G A G C T A G C T G T C A A C T G C G T A A C T G C T A G A C G T A C G T A C G T
A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A

Nr2f6/MA0677.1/Jaspar

Match Rank:6
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-AGGTTAGAGG---
GAGGTCAAAGGTCA
 A C G T C G T A C A T G A C T G A G C T A G C T G T C A A C T G C G T A A C T G C T A G A C G T A C G T A C G T
T C A G T C G A C A T G C A T G A C G T A G T C C G T A C T G A T C G A A C T G C A T G A C G T A G T C C T G A

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:7
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-AGGTTAGAGG
CAGGTAAGTAT
 A C G T C G T A C A T G A C T G A G C T A G C T G T C A A C T G C G T A A C T G C T A G
T G A C C G T A C T A G A C T G A C G T C T G A C G T A C T A G C G A T C T G A G A C T

TBX15/MA0803.1/Jaspar

Match Rank:8
Score:0.58
Offset:0
Orientation:forward strand
Alignment:AGGTTAGAGG
AGGTGTGA--
 C G T A C A T G A C T G A G C T A G C T G T C A A C T G C G T A A C T G C T A G
C T G A C T A G T C A G A C G T A T C G A G C T A C T G C T G A A C G T A C G T

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:9
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-AGGTTAGAGG---
TGGGGCAAAGGTCA
 A C G T C G T A C A T G A C T G A G C T A G C T G T C A A C T G C G T A A C T G C T A G A C G T A C G T A C G T
C A G T C T A G C A T G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A

NR1H2::RXRA/MA0115.1/Jaspar

Match Rank:10
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--AGGTTAGAGG-----
AAAGGTCAAAGGTCAAC
 A C G T A C G T C G T A C A T G A C T G A G C T A G C T G T C A A C T G C G T A A C T G C T A G A C G T A C G T A C G T A C G T A C G T
G T C A C T G A C T G A A C T G A C T G A C G T A G T C C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A C G T A A T G C