Information for 7-AGTCTGAGAAGGC (Motif 12)

C G T A A C T G A C G T A T G C A C G T A C T G C G T A A C T G C G T A C G T A A C T G A C T G G T A C
Reverse Opposite:
A C T G A G T C A G T C C G A T A C G T A G T C C G A T A G T C C G T A A T C G C G T A A G T C A C G T
p-value:1e-10
log p-value:-2.471e+01
Information Content per bp:1.939
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.57%
Number of Background Sequences with motif0.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets37.0 +/- 22.8bp
Average Position of motif in Background19.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:1
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-AGTCTGAGAAGGC
TWGTCTGV------
 A C G T C G T A A C T G A C G T A T G C A C G T A C T G C G T A A C T G C G T A C G T A A C T G A C T G G T A C
A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T

PB0022.1_Gata5_1/Jaspar

Match Rank:2
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-AGTCTGAGAAGGC---
TAAACTGATAAGAAGAT
 A C G T C G T A A C T G A C G T A T G C A C G T A C T G C G T A A C T G C G T A C G T A A C T G A C T G G T A C A C G T A C G T A C G T
G C A T C G T A C G T A C T G A A G T C G C A T A C T G C G T A C G A T G C T A C G T A T A C G T C G A T C G A C A T G C G T A C A G T

STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer

Match Rank:3
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-AGTCTGAGAAGGC
NTTTCTNAGAAA--
 A C G T C G T A A C T G A C G T A T G C A C G T A C T G C G T A A C T G C G T A C G T A A C T G A C T G G T A C
C T G A A C G T A C G T A C G T A G T C G A C T C G A T C T G A A C T G C G T A C G T A T C G A A C G T A C G T

PB0138.1_Irf4_2/Jaspar

Match Rank:4
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-AGTCTGAGAAGGC-
GNNACCGAGAATNNN
 A C G T C G T A A C T G A C G T A T G C A C G T A C T G C G T A A C T G C G T A C G T A A C T G A C T G G T A C A C G T
A T C G G T A C C T G A G C T A A G T C A G T C C A T G T C G A C A T G G C T A C T G A C G A T T C G A A T G C A G C T

Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer

Match Rank:5
Score:0.54
Offset:3
Orientation:forward strand
Alignment:AGTCTGAGAAGGC
---CAGATAAGGN
 C G T A A C T G A C G T A T G C A C G T A C T G C G T A A C T G C G T A C G T A A C T G A C T G G T A C
A C G T A C G T A C G T T A G C G C T A A C T G C G T A A C G T C G T A C G T A T A C G T C A G T C G A

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-AGTCTGAGAAGGC
CTGTCTGG------
 A C G T C G T A A C T G A C G T A T G C A C G T A C T G C G T A A C T G C G T A C G T A A C T G A C T G G T A C
A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T A C G T A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---AGTCTGAGAAGGC
VBSYGTCTGG------
 A C G T A C G T A C G T C G T A A C T G A C G T A T G C A C G T A C T G C G T A A C T G C G T A C G T A A C T G A C T G G T A C
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T A C G T A C G T A C G T A C G T

PB0098.1_Zfp410_1/Jaspar

Match Rank:8
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-AGTCTGAGAAGGC---
TATTATGGGATGGATAA
 A C G T C G T A A C T G A C G T A T G C A C G T A C T G C G T A A C T G C G T A C G T A A C T G A C T G G T A C A C G T A C G T A C G T
C G A T T C G A C A G T C G A T G T C A C G A T C A T G C A T G C A T G C T G A C A G T C T A G A C T G T G C A C A G T C G T A T G C A

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:9
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:AGTCTGAGAAGGC
--CSTGGGAAAD-
 C G T A A C T G A C G T A T G C A C G T A C T G C G T A A C T G C G T A C G T A A C T G A C T G G T A C
A C G T A C G T A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.52
Offset:0
Orientation:forward strand
Alignment:AGTCTGAGAAGGC
WDNCTGGGCA---
 C G T A A C T G A C G T A T G C A C G T A C T G C G T A A C T G C G T A C G T A A C T G A C T G G T A C
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T A C G T