Information for 6-TGCTGGGARATGGAGT (Motif 9)

A G C T A C T G A G T C C G A T C T A G C T A G A C T G C G T A T C A G T C G A A G C T C A T G A C T G C T G A A C T G A C G T
Reverse Opposite:
C G T A A G T C A G C T T G A C G A T C C T G A A G C T A G T C A C G T A G T C A G T C A G T C C G T A A C T G A G T C T C G A
p-value:1e-12
log p-value:-2.808e+01
Information Content per bp:1.767
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.47%
Number of Background Sequences with motif41.6
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets60.7 +/- 20.5bp
Average Position of motif in Background50.7 +/- 29.1bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer

Match Rank:1
Score:0.79
Offset:-3
Orientation:reverse strand
Alignment:---TGCTGGGARATGGAGT-
GCMTBCTGGGAGTTGTAGTY
 A C G T A C G T A C G T A G C T A C T G A G T C C G A T C T A G C T A G A C T G C G T A T C A G T C G A A G C T C A T G A C T G C T G A A C T G A C G T A C G T
C A T G T A G C G T A C A G C T A C G T T G A C A G C T C T A G A C T G C T A G C G T A T C A G G C A T A G C T A C T G C G A T C T G A A C T G A C G T A G T C

GFY-Staf(?,Zf)/Promoter/Homer

Match Rank:2
Score:0.78
Offset:-3
Orientation:reverse strand
Alignment:---TGCTGGGARATGGAGT-
GCATTCTGGGAATTGTAGTT
 A C G T A C G T A C G T A G C T A C T G A G T C C G A T C T A G C T A G A C T G C G T A T C A G T C G A A G C T C A T G A C T G C T G A A C T G A C G T A C G T
T C A G T A G C G T C A A G C T A C G T A G T C A G C T A C T G A C T G C T A G C G T A C T G A C G A T A G C T A C T G A C G T C T G A A C T G A C G T A G C T

GFY(?)/Promoter/Homer

Match Rank:3
Score:0.74
Offset:4
Orientation:reverse strand
Alignment:TGCTGGGARATGGAGT
----GGGAATTGTAGT
 A G C T A C T G A G T C C G A T C T A G C T A G A C T G C G T A T C A G T C G A A G C T C A T G A C T G C T G A A C T G A C G T
A C G T A C G T A C G T A C G T C A T G T C A G T C A G T C G A T C G A G C A T A C G T A C T G A C G T C T G A A T C G A C G T

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:4
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----TGCTGGGARATGGAGT
RGSMTBCTGGGAAAT-----
 A C G T A C G T A C G T A C G T A G C T A C T G A G T C C G A T C T A G C T A G A C T G C G T A T C A G T C G A A G C T C A T G A C T G C T G A A C T G A C G T
C T A G A C T G T A G C G T C A A G C T A G C T T G A C G A C T A C T G A C T G A C T G C G T A T C G A C G T A A C G T A C G T A C G T A C G T A C G T A C G T

STAT3/MA0144.2/Jaspar

Match Rank:5
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-TGCTGGGARATGGAGT
CTTCTGGGAAA------
 A C G T A G C T A C T G A G T C C G A T C T A G C T A G A C T G C G T A T C A G T C G A A G C T C A T G A C T G C T G A A C T G A C G T
A G T C C G A T A C G T G A T C G A C T C A T G C T A G C T A G C G T A C G T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:6
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----TGCTGGGARATGGAGT
TCNCCTGCTGNGNNN------
 A C G T A C G T A C G T A C G T A C G T A G C T A C T G A G T C C G A T C T A G C T A G A C T G C G T A T C A G T C G A A G C T C A T G A C T G C T G A A C T G A C G T
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G A C G T A C G T A C G T A C G T A C G T A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:7
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----TGCTGGGARATGGAGT
TNTCCTGCTGTGNNG------
 A C G T A C G T A C G T A C G T A C G T A G C T A C T G A G T C C G A T C T A G C T A G A C T G C G T A T C A G T C G A A G C T C A T G A C T G C T G A A C T G A C G T
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G A C G T A C G T A C G T A C G T A C G T A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-TGCTGGGARATGGAGT
WDNCTGGGCA-------
 A C G T A G C T A C T G A G T C C G A T C T A G C T A G A C T G C G T A T C A G T C G A A G C T C A T G A C T G C T G A A C T G A C G T
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:9
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--TGCTGGGARATGGAGT
CCTGCTGAGH--------
 A C G T A C G T A G C T A C T G A G T C C G A T C T A G C T A G A C T G C G T A T C A G T C G A A G C T C A T G A C T G C T G A A C T G A C G T
A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:10
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:TGCTGGGARATGGAGT
-CSTGGGAAAD-----
 A G C T A C T G A G T C C G A T C T A G C T A G A C T G C G T A T C A G T C G A A G C T C A T G A C T G C T G A A C T G A C G T
A C G T A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A A C G T A C G T A C G T A C G T A C G T