Information for 17-AGCCAATCAG (Motif 22)

G C T A C A T G G T A C A T G C G T C A G C T A A C G T A G T C C G T A A C T G
Reverse Opposite:
A G T C A C G T T C A G G T C A C G A T A C G T A T C G A C T G G T A C C G A T
p-value:1e-7
log p-value:-1.612e+01
Information Content per bp:1.824
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif1.99%
Number of Background Sequences with motif199.7
Percentage of Background Sequences with motif0.44%
Average Position of motif in Targets64.4 +/- 26.1bp
Average Position of motif in Background44.7 +/- 33.7bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFYB/MA0502.1/Jaspar

Match Rank:1
Score:0.87
Offset:-5
Orientation:forward strand
Alignment:-----AGCCAATCAG
AAATGGACCAATCAG
 A C G T A C G T A C G T A C G T A C G T G C T A C A T G G T A C A T G C G T C A G C T A A C G T A G T C C G T A A C T G
T C G A G T C A G T C A A G C T A T C G T C A G C T G A A G T C A G T C C G T A C T G A A C G T T A G C T C G A T A C G

NFY(CCAAT)/Promoter/Homer

Match Rank:2
Score:0.87
Offset:0
Orientation:forward strand
Alignment:AGCCAATCAG
AGCCAATCGG
 G C T A C A T G G T A C A T G C G T C A G C T A A C G T A G T C C G T A A C T G
T C G A C T A G A G T C A G T C C G T A C G T A A C G T T A G C T C A G T A C G

POL004.1_CCAAT-box/Jaspar

Match Rank:3
Score:0.83
Offset:-3
Orientation:forward strand
Alignment:---AGCCAATCAG
ACTAGCCAATCA-
 A C G T A C G T A C G T G C T A C A T G G T A C A T G C G T C A G C T A A C G T A G T C C G T A A C T G
G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A A C G T

NFYA/MA0060.2/Jaspar

Match Rank:4
Score:0.81
Offset:-2
Orientation:reverse strand
Alignment:--AGCCAATCAG------
TGGACCAATCAGCACTCT
 A C G T A C G T G C T A C A T G G T A C A T G C G T C A G C T A A C G T A G T C C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A G C T A T C G T C A G C T G A A T G C A G T C C G T A T C G A G A C T T A G C T C G A T C A G T G A C C T G A A T G C A C G T G T A C C G A T

Dux/MA0611.1/Jaspar

Match Rank:5
Score:0.76
Offset:2
Orientation:forward strand
Alignment:AGCCAATCAG
--CCAATCAA
 G C T A C A T G G T A C A T G C G T C A G C T A A C G T A G T C C G T A A C T G
A C G T A C G T A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A

PH0026.1_Duxbl/Jaspar

Match Rank:6
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--AGCCAATCAG-----
CGACCCAATCAACGGTG
 A C G T A C G T G C T A C A T G G T A C A T G C G T C A G C T A A C G T A G T C C G T A A C T G A C G T A C G T A C G T A C G T A C G T
A G T C C T A G C T G A A G T C A G T C A G T C G T C A G T C A A G C T A G T C C G T A C T G A A G T C T A C G T C A G G C A T T A C G

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:7
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--AGCCAATCAG
SCTGTCAVTCAV
 A C G T A C G T G C T A C A T G G T A C A T G C G T C A G C T A A C G T A G T C C G T A A C T G
T A C G A T G C G A C T A C T G A G C T A G T C G T C A T G C A A C G T A G T C G C T A T G C A

EN2/MA0642.1/Jaspar

Match Rank:8
Score:0.70
Offset:1
Orientation:forward strand
Alignment:AGCCAATCAG-
-CCCAATTAGC
 G C T A C A T G G T A C A T G C G T C A G C T A A C G T A G T C C G T A A C T G A C G T
A C G T T A G C A T G C A G T C T G C A T G C A A C G T A G C T C T G A T A C G A T G C

PH0098.1_Lhx8/Jaspar

Match Rank:9
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---AGCCAATCAG----
CACCGCTAATTAGNNGN
 A C G T A C G T A C G T G C T A C A T G G T A C A T G C G T C A G C T A A C G T A G T C C G T A A C T G A C G T A C G T A C G T A C G T
G A T C T G C A G T A C G T A C T C A G T G A C G A C T T C G A C T G A A G C T A G C T C T G A A C T G A C T G A C T G A C T G C G A T

LBX2/MA0699.1/Jaspar

Match Rank:10
Score:0.67
Offset:1
Orientation:forward strand
Alignment:AGCCAATCAG-
-GCCAATTAGC
 G C T A C A T G G T A C A T G C G T C A G C T A A C G T A G T C C G T A A C T G A C G T
A C G T T C A G A G T C G A T C T G C A T G C A A C G T A C G T C G T A C T A G T A G C