Information for 10-CCCAGCCAAC (Motif 10)

T A G C G A T C G T A C T G C A A T C G A G T C T G A C T C G A G C T A G T A C
Reverse Opposite:
C A T G C G A T A G C T A C T G T C A G A T G C A C G T A C T G C T A G A T C G
p-value:1e-11
log p-value:-2.716e+01
Information Content per bp:1.690
Number of Target Sequences with motif72.0
Percentage of Target Sequences with motif7.54%
Number of Background Sequences with motif1338.8
Percentage of Background Sequences with motif2.96%
Average Position of motif in Targets40.4 +/- 27.1bp
Average Position of motif in Background49.4 +/- 31.1bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:1
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:CCCAGCCAAC
-BCAGACWA-
 T A G C G A T C G T A C T G C A A T C G A G T C T G A C T C G A G C T A G T A C
A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T

PB0167.1_Sox13_2/Jaspar

Match Rank:2
Score:0.66
Offset:-5
Orientation:reverse strand
Alignment:-----CCCAGCCAAC--
ANNTNCCCACCCANNAC
 A C G T A C G T A C G T A C G T A C G T T A G C G A T C G T A C T G C A A T C G A G T C T G A C T C G A G C T A G T A C A C G T A C G T
G T C A C G T A C G A T C G A T C G T A G T A C G T A C T A G C C G T A G A T C G T A C G T A C C T G A C T G A G A C T G C T A G A T C

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--CCCAGCCAAC
TGCCCAGNHW--
 A C G T A C G T T A G C G A T C G T A C T G C A A T C G A G T C T G A C T C G A G C T A G T A C
C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:4
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:CCCAGCCAAC
---TGCCAA-
 T A G C G A T C G T A C T G C A A T C G A G T C T G A C T C G A G C T A G T A C
A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T

NFIX/MA0671.1/Jaspar

Match Rank:5
Score:0.63
Offset:1
Orientation:forward strand
Alignment:CCCAGCCAAC
-CGTGCCAAG
 T A G C G A T C G T A C T G C A A T C G A G T C T G A C T C G A G C T A G T A C
A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:6
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CCCAGCCAAC----
TCCCAGMCRAGCCCC
 A C G T T A G C G A T C G T A C T G C A A T C G A G T C T G A C T C G A G C T A G T A C A C G T A C G T A C G T A C G T
A G C T A G T C A G T C A G T C C T G A T C A G T G C A G A T C T C G A C G T A A C T G A T G C G T A C G T A C G A T C

PB0164.1_Smad3_2/Jaspar

Match Rank:7
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----CCCAGCCAAC---
TACGCCCCGCCACTCTG
 A C G T A C G T A C G T A C G T T A G C G A T C G T A C T G C A A T C G A G T C T G A C T C G A G C T A G T A C A C G T A C G T A C G T
C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:8
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CCCAGCCAAC-
GCTCCGCCCMCY
 A C G T T A G C G A T C G T A C T G C A A T C G A G T C T G A C T C G A G C T A G T A C A C G T
C T A G A G T C G A C T G T A C A T G C C T A G A G T C A G T C A G T C G T C A A G T C G A C T

POL009.1_DCE_S_II/Jaspar

Match Rank:9
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CCCAGCCAAC
CACAGN----
 T A G C G A T C G T A C T G C A A T C G A G T C T G A C T C G A G C T A G T A C
T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:10
Score:0.59
Offset:2
Orientation:forward strand
Alignment:CCCAGCCAAC
--CAGCC---
 T A G C G A T C G T A C T G C A A T C G A G T C T G A C T C G A G C T A G T A C
A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T