Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
1 |
| ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer | 1e-156 | -3.608e+02 | 0.0000 | 171.0 | 27.40% | 714.0 | 1.51% | motif file (matrix) |
svg |
2 |
| COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer | 1e-24 | -5.734e+01 | 0.0000 | 165.0 | 26.44% | 5334.8 | 11.29% | motif file (matrix) |
svg |
3 |
| THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer | 1e-22 | -5.186e+01 | 0.0000 | 280.0 | 44.87% | 12482.8 | 26.42% | motif file (matrix) |
svg |
4 |
| ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer | 1e-21 | -5.045e+01 | 0.0000 | 45.0 | 7.21% | 518.8 | 1.10% | motif file (matrix) |
svg |
5 |
| Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer | 1e-12 | -2.833e+01 | 0.0000 | 99.0 | 15.87% | 3462.3 | 7.33% | motif file (matrix) |
svg |
6 |
| Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer | 1e-11 | -2.717e+01 | 0.0000 | 152.0 | 24.36% | 6532.0 | 13.83% | motif file (matrix) |
svg |
7 |
| Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer | 1e-11 | -2.559e+01 | 0.0000 | 92.0 | 14.74% | 3260.6 | 6.90% | motif file (matrix) |
svg |
8 |
| PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer | 1e-10 | -2.473e+01 | 0.0000 | 122.0 | 19.55% | 4973.5 | 10.53% | motif file (matrix) |
svg |
9 |
| GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer | 1e-10 | -2.383e+01 | 0.0000 | 27.0 | 4.33% | 423.9 | 0.90% | motif file (matrix) |
svg |
10 |
| Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer | 1e-10 | -2.323e+01 | 0.0000 | 58.0 | 9.29% | 1691.9 | 3.58% | motif file (matrix) |
svg |
11 |
| Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer | 1e-9 | -2.227e+01 | 0.0000 | 50.0 | 8.01% | 1367.3 | 2.89% | motif file (matrix) |
svg |
12 |
| Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer | 1e-8 | -2.042e+01 | 0.0000 | 62.0 | 9.94% | 2022.5 | 4.28% | motif file (matrix) |
svg |
13 |
| Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer | 1e-8 | -1.902e+01 | 0.0000 | 23.0 | 3.69% | 391.4 | 0.83% | motif file (matrix) |
svg |
14 |
| Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer | 1e-7 | -1.835e+01 | 0.0000 | 90.0 | 14.42% | 3652.3 | 7.73% | motif file (matrix) |
svg |
15 |
| FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer | 1e-7 | -1.770e+01 | 0.0000 | 55.0 | 8.81% | 1822.5 | 3.86% | motif file (matrix) |
svg |
16 |
| ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer | 1e-7 | -1.761e+01 | 0.0000 | 49.0 | 7.85% | 1532.6 | 3.24% | motif file (matrix) |
svg |
17 |
| Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer | 1e-7 | -1.708e+01 | 0.0000 | 52.0 | 8.33% | 1707.1 | 3.61% | motif file (matrix) |
svg |
18 |
| ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer | 1e-7 | -1.616e+01 | 0.0000 | 46.0 | 7.37% | 1461.2 | 3.09% | motif file (matrix) |
svg |
19 |
| Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer | 1e-6 | -1.604e+01 | 0.0000 | 23.0 | 3.69% | 462.8 | 0.98% | motif file (matrix) |
svg |
20 |
| Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer | 1e-6 | -1.571e+01 | 0.0000 | 45.0 | 7.21% | 1436.4 | 3.04% | motif file (matrix) |
svg |
21 |
| FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer | 1e-6 | -1.441e+01 | 0.0000 | 43.0 | 6.89% | 1407.6 | 2.98% | motif file (matrix) |
svg |
22 |
| Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer | 1e-6 | -1.431e+01 | 0.0000 | 49.0 | 7.85% | 1715.1 | 3.63% | motif file (matrix) |
svg |
23 |
| GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer | 1e-5 | -1.306e+01 | 0.0000 | 15.0 | 2.40% | 252.4 | 0.53% | motif file (matrix) |
svg |
24 |
| SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer | 1e-5 | -1.198e+01 | 0.0001 | 56.0 | 8.97% | 2252.2 | 4.77% | motif file (matrix) |
svg |
25 |
| FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer | 1e-5 | -1.196e+01 | 0.0001 | 43.0 | 6.89% | 1552.2 | 3.29% | motif file (matrix) |
svg |
26 |
| EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer | 1e-4 | -1.143e+01 | 0.0002 | 66.0 | 10.58% | 2867.4 | 6.07% | motif file (matrix) |
svg |
27 |
| Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer | 1e-4 | -1.138e+01 | 0.0002 | 49.0 | 7.85% | 1913.5 | 4.05% | motif file (matrix) |
svg |
28 |
| Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer | 1e-4 | -1.136e+01 | 0.0002 | 16.0 | 2.56% | 328.7 | 0.70% | motif file (matrix) |
svg |
29 |
| Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer | 1e-4 | -1.063e+01 | 0.0003 | 31.0 | 4.97% | 1022.1 | 2.16% | motif file (matrix) |
svg |
30 |
| JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer | 1e-4 | -1.030e+01 | 0.0004 | 32.0 | 5.13% | 1090.0 | 2.31% | motif file (matrix) |
svg |
31 |
| FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer | 1e-4 | -1.013e+01 | 0.0005 | 32.0 | 5.13% | 1100.8 | 2.33% | motif file (matrix) |
svg |
32 |
| Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer | 1e-4 | -1.009e+01 | 0.0005 | 42.0 | 6.73% | 1628.9 | 3.45% | motif file (matrix) |
svg |
33 |
| PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer | 1e-4 | -1.000e+01 | 0.0005 | 16.0 | 2.56% | 368.8 | 0.78% | motif file (matrix) |
svg |
34 |
| Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer | 1e-4 | -9.842e+00 | 0.0006 | 23.0 | 3.69% | 678.7 | 1.44% | motif file (matrix) |
svg |
35 |
| CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer | 1e-4 | -9.804e+00 | 0.0006 | 31.0 | 4.97% | 1069.8 | 2.26% | motif file (matrix) |
svg |
36 |
| BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer | 1e-4 | -9.739e+00 | 0.0006 | 34.0 | 5.45% | 1227.8 | 2.60% | motif file (matrix) |
svg |
37 |
| AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer | 1e-4 | -9.535e+00 | 0.0007 | 189.0 | 30.29% | 11138.9 | 23.58% | motif file (matrix) |
svg |
38 |
| FOXK1(Forkhead)/HEK293-FOXK1-ChIP-Seq(GSE51673)/Homer | 1e-4 | -9.531e+00 | 0.0007 | 42.0 | 6.73% | 1670.1 | 3.53% | motif file (matrix) |
svg |
39 |
| Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer | 1e-4 | -9.409e+00 | 0.0008 | 18.0 | 2.88% | 472.9 | 1.00% | motif file (matrix) |
svg |
40 |
| ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer | 1e-3 | -8.752e+00 | 0.0014 | 69.0 | 11.06% | 3323.6 | 7.03% | motif file (matrix) |
svg |
41 |
| Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer | 1e-3 | -8.602e+00 | 0.0016 | 44.0 | 7.05% | 1858.2 | 3.93% | motif file (matrix) |
svg |
42 |
| Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer | 1e-3 | -8.583e+00 | 0.0016 | 27.0 | 4.33% | 939.8 | 1.99% | motif file (matrix) |
svg |
43 |
| Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer | 1e-3 | -8.375e+00 | 0.0020 | 33.0 | 5.29% | 1267.7 | 2.68% | motif file (matrix) |
svg |
44 |
| FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer | 1e-3 | -8.284e+00 | 0.0021 | 29.0 | 4.65% | 1061.1 | 2.25% | motif file (matrix) |
svg |
45 |
| Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer | 1e-3 | -8.213e+00 | 0.0022 | 15.0 | 2.40% | 388.0 | 0.82% | motif file (matrix) |
svg |
46 |
| FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer | 1e-3 | -7.683e+00 | 0.0036 | 19.0 | 3.04% | 593.3 | 1.26% | motif file (matrix) |
svg |
47 |
| HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer | 1e-3 | -7.584e+00 | 0.0039 | 29.0 | 4.65% | 1109.8 | 2.35% | motif file (matrix) |
svg |
48 |
| Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer | 1e-3 | -7.406e+00 | 0.0046 | 56.0 | 8.97% | 2686.9 | 5.69% | motif file (matrix) |
svg |
49 |
| Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer | 1e-3 | -7.207e+00 | 0.0055 | 30.0 | 4.81% | 1191.9 | 2.52% | motif file (matrix) |
svg |
50 |
| NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer | 1e-2 | -6.888e+00 | 0.0074 | 100.0 | 16.03% | 5575.0 | 11.80% | motif file (matrix) |
svg |
51 |
| NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer | 1e-2 | -6.796e+00 | 0.0080 | 28.0 | 4.49% | 1113.1 | 2.36% | motif file (matrix) |
svg |
52 |
| PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer | 1e-2 | -6.591e+00 | 0.0096 | 22.0 | 3.53% | 806.8 | 1.71% | motif file (matrix) |
svg |
53 |
| Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967) | 1e-2 | -6.573e+00 | 0.0096 | 46.0 | 7.37% | 2175.1 | 4.60% | motif file (matrix) |
svg |
54 |
| ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer | 1e-2 | -6.497e+00 | 0.0102 | 76.0 | 12.18% | 4066.2 | 8.61% | motif file (matrix) |
svg |
55 |
| GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer | 1e-2 | -6.490e+00 | 0.0102 | 45.0 | 7.21% | 2124.2 | 4.50% | motif file (matrix) |
svg |
56 |
| RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer | 1e-2 | -6.481e+00 | 0.0102 | 12.0 | 1.92% | 324.3 | 0.69% | motif file (matrix) |
svg |
57 |
| Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer | 1e-2 | -6.367e+00 | 0.0110 | 19.0 | 3.04% | 665.7 | 1.41% | motif file (matrix) |
svg |
58 |
| ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer | 1e-2 | -6.363e+00 | 0.0110 | 29.0 | 4.65% | 1203.1 | 2.55% | motif file (matrix) |
svg |
59 |
| SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer | 1e-2 | -6.304e+00 | 0.0113 | 29.0 | 4.65% | 1208.1 | 2.56% | motif file (matrix) |
svg |
60 |
| AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer | 1e-2 | -6.180e+00 | 0.0126 | 33.0 | 5.29% | 1447.6 | 3.06% | motif file (matrix) |
svg |
61 |
| Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer | 1e-2 | -5.970e+00 | 0.0152 | 28.0 | 4.49% | 1180.1 | 2.50% | motif file (matrix) |
svg |
62 |
| EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer | 1e-2 | -5.733e+00 | 0.0190 | 34.0 | 5.45% | 1549.5 | 3.28% | motif file (matrix) |
svg |
63 |
| GRHL2(CP2)/HBE-GRHL2-ChIP-Seq(GSE46194)/Homer | 1e-2 | -5.729e+00 | 0.0190 | 18.0 | 2.88% | 653.8 | 1.38% | motif file (matrix) |
svg |
64 |
| Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer | 1e-2 | -5.690e+00 | 0.0192 | 19.0 | 3.04% | 708.0 | 1.50% | motif file (matrix) |
svg |
65 |
| KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer | 1e-2 | -5.682e+00 | 0.0192 | 71.0 | 11.38% | 3871.1 | 8.19% | motif file (matrix) |
svg |
66 |
| ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer | 1e-2 | -5.521e+00 | 0.0221 | 47.0 | 7.53% | 2363.9 | 5.00% | motif file (matrix) |
svg |
67 |
| PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer | 1e-2 | -5.393e+00 | 0.0247 | 25.0 | 4.01% | 1060.7 | 2.25% | motif file (matrix) |
svg |
68 |
| PAX6(Paired,Homeobox)/Forebrain-Pax6-ChIP-Seq(GSE66961)/Homer | 1e-2 | -5.326e+00 | 0.0260 | 6.0 | 0.96% | 116.8 | 0.25% | motif file (matrix) |
svg |
69 |
| Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer | 1e-2 | -4.825e+00 | 0.0423 | 29.0 | 4.65% | 1347.5 | 2.85% | motif file (matrix) |
svg |
70 |
| Atf7(bZIP)/3T3L1-Atf7-ChIP-Seq(GSE56872)/Homer | 1e-2 | -4.813e+00 | 0.0423 | 22.0 | 3.53% | 940.8 | 1.99% | motif file (matrix) |
svg |
71 |
| TATA-Box(TBP)/Promoter/Homer | 1e-2 | -4.800e+00 | 0.0423 | 38.0 | 6.09% | 1898.0 | 4.02% | motif file (matrix) |
svg |
72 |
| c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer | 1e-2 | -4.725e+00 | 0.0449 | 15.0 | 2.40% | 561.2 | 1.19% | motif file (matrix) |
svg |
73 |
| Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer | 1e-2 | -4.720e+00 | 0.0449 | 7.0 | 1.12% | 173.0 | 0.37% | motif file (matrix) |
svg |
74 |
| Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer | 1e-2 | -4.637e+00 | 0.0477 | 38.0 | 6.09% | 1918.6 | 4.06% | motif file (matrix) |
svg |