Information for 7-WGCAGAACAATGN (Motif 5)

C G A T T C A G G T A C C T G A C T A G G T C A G T C A A T G C G T C A C G T A C G A T T C A G C A G T
Reverse Opposite:
G T C A A G T C G C T A G C A T A C G T T A C G A C G T C A G T A G T C G A C T C A T G A G T C G C T A
p-value:1e-17
log p-value:-3.985e+01
Information Content per bp:1.599
Number of Target Sequences with motif68.0
Percentage of Target Sequences with motif10.90%
Number of Background Sequences with motif1514.1
Percentage of Background Sequences with motif3.20%
Average Position of motif in Targets51.0 +/- 28.8bp
Average Position of motif in Background48.8 +/- 30.3bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox6/MA0515.1/Jaspar

Match Rank:1
Score:0.81
Offset:3
Orientation:reverse strand
Alignment:WGCAGAACAATGN
---AAAACAATGG
 C G A T T C A G G T A C C T G A C T A G G T C A G T C A A T G C G T C A C G T A C G A T T C A G C A G T
A C G T A C G T A C G T T C G A C T G A T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:2
Score:0.81
Offset:3
Orientation:reverse strand
Alignment:WGCAGAACAATGN
---GGAACAAAGR
 C G A T T C A G G T A C C T G A C T A G G T C A G T C A A T G C G T C A C G T A C G A T T C A G C A G T
A C G T A C G T A C G T T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:3
Score:0.80
Offset:3
Orientation:reverse strand
Alignment:WGCAGAACAATGN
---VRRACAAWGG
 C G A T T C A G G T A C C T G A C T A G G T C A G T C A A T G C G T C A C G T A C G A T T C A G C A G T
A C G T A C G T A C G T T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G

PB0061.1_Sox11_1/Jaspar

Match Rank:4
Score:0.80
Offset:0
Orientation:forward strand
Alignment:WGCAGAACAATGN----
ATAAGAACAAAGGACTA
 C G A T T C A G G T A C C T G A C T A G G T C A G T C A A T G C G T C A C G T A C G A T T C A G C A G T A C G T A C G T A C G T A C G T
G C T A A C G T C G T A C G T A C T A G T C G A C G T A A G T C C G T A G T C A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.80
Offset:4
Orientation:reverse strand
Alignment:WGCAGAACAATGN-
----GAACAATGGN
 C G A T T C A G G T A C C T G A C T A G G T C A G T C A A T G C G T C A C G T A C G A T T C A G C A G T A C G T
A C G T A C G T A C G T A C G T C T A G T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G T A C G

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:6
Score:0.79
Offset:4
Orientation:forward strand
Alignment:WGCAGAACAATGN-
----RAACAATGGN
 C G A T T C A G G T A C C T G A C T A G G T C A G T C A A T G C G T C A C G T A C G A T T C A G C A G T A C G T
A C G T A C G T A C G T A C G T C T G A T C G A C G T A A T G C C G T A C G T A C G A T C T A G T C A G G A T C

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:7
Score:0.79
Offset:3
Orientation:reverse strand
Alignment:WGCAGAACAATGN
---RNAACAATGG
 C G A T T C A G G T A C C T G A C T A G G T C A G T C A A T G C G T C A C G T A C G A T T C A G C A G T
A C G T A C G T A C G T T C G A T C A G T C G A T C G A A T G C C G T A T C G A G C A T C A T G T A C G

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:8
Score:0.79
Offset:3
Orientation:reverse strand
Alignment:WGCAGAACAATGN
---VRAACAATGG
 C G A T T C A G G T A C C T G A C T A G G T C A G T C A A T G C G T C A C G T A C G A T T C A G C A G T
A C G T A C G T A C G T T G A C C T G A T C G A C G T A T A G C G T C A T C G A G C A T C T A G T A C G

PB0071.1_Sox4_1/Jaspar

Match Rank:9
Score:0.79
Offset:0
Orientation:forward strand
Alignment:WGCAGAACAATGN----
AGAAGAACAAAGGACTA
 C G A T T C A G G T A C C T G A C T A G G T C A G T C A A T G C G T C A C G T A C G A T T C A G C A G T A C G T A C G T A C G T A C G T
G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

SOX10/MA0442.1/Jaspar

Match Rank:10
Score:0.78
Offset:6
Orientation:reverse strand
Alignment:WGCAGAACAATGN
------ACAAAG-
 C G A T T C A G G T A C C T G A C T A G G T C A G T C A A T G C G T C A C G T A C G A T T C A G C A G T
A C G T A C G T A C G T A C G T A C G T A C G T G T C A A T G C C G T A T G C A C G T A C T A G A C G T