Information for 25-GGTCTGTGCAGAG (Motif 39)

A C T G C T A G A C G T A G T C A G C T A C T G A C G T A C T G A G T C C G T A C T A G C T G A A C T G
Reverse Opposite:
A G T C A G C T A G T C A C G T A C T G A G T C C G T A A G T C C T G A A C T G C G T A A G T C A G T C
p-value:1e-4
log p-value:-9.357e+00
Information Content per bp:1.941
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.32%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets44.3 +/- 27.0bp
Average Position of motif in Background50.6 +/- 15.5bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)3.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0026.1_Gm397_1/Jaspar

Match Rank:1
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GGTCTGTGCAGAG---
NNGTATGTGCACATNNN
 A C G T A C T G C T A G A C G T A G T C A G C T A C T G A C G T A C T G A G T C C G T A C T A G C T G A A C T G A C G T A C G T A C G T
C T G A G T A C C A T G C A G T T C G A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A G C A T G T A C C G A T C A T G

PB0104.1_Zscan4_1/Jaspar

Match Rank:2
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GGTCTGTGCAGAG---
NTNTATGTGCACATNNN
 A C G T A C T G C T A G A C G T A G T C A G C T A C T G A C G T A C T G A G T C C G T A C T A G C T G A A C T G A C G T A C G T A C G T
C A G T G C A T C G A T C G A T C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A G A C T A C T G C A G T G T C A

PB0091.1_Zbtb3_1/Jaspar

Match Rank:3
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GGTCTGTGCAGAG-----
-NNNANTGCAGTGCNNTT
 A C T G C T A G A C G T A G T C A G C T A C T G A C G T A C T G A G T C C G T A C T A G C T G A A C T G A C G T A C G T A C G T A C G T A C G T
A C G T T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GGTCTGTGCAGAG
WDNCTGGGCA---
 A C T G C T A G A C G T A G T C A G C T A C T G A C G T A C T G A G T C C G T A C T A G C T G A A C T G
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:5
Score:0.55
Offset:2
Orientation:forward strand
Alignment:GGTCTGTGCAGAG
--GCTGTG-----
 A C T G C T A G A C G T A G T C A G C T A C T G A C G T A C T G A G T C C G T A C T A G C T G A A C T G
A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T A C G T

PB0130.1_Gm397_2/Jaspar

Match Rank:6
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---GGTCTGTGCAGAG
NNGCGTGTGTGCNGCN
 A C G T A C G T A C G T A C T G C T A G A C G T A G T C A G C T A C T G A C G T A C T G A G T C C G T A C T A G C T G A A C T G
C A G T A C G T C T A G T G A C C A T G A C G T T A C G A G C T C A T G A G C T A C T G A G T C A G T C C A T G A G T C G A C T

MTF1/MA0863.1/Jaspar

Match Rank:7
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--GGTCTGTGCAGAG
GTGCCGTGTGCAAA-
 A C G T A C G T A C T G C T A G A C G T A G T C A G C T A C T G A C G T A C T G A G T C C G T A C T A G C T G A A C T G
C T A G A C G T C T A G G T A C G A T C A C T G A C G T A C T G G A C T A C T G A G T C C G T A T G C A G T C A A C G T

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:8
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:GGTCTGTGCAGAG----
NSTGTTTRCWCAGBNNN
 A C T G C T A G A C G T A G T C A G C T A C T G A C G T A C T G A G T C C G T A C T A G C T G A A C T G A C G T A C G T A C G T A C G T
G A C T A T G C A C G T C T A G C G A T C A G T C A G T T C G A G A T C G C T A A G T C C G T A T C A G A T G C T A G C G A C T T A C G

PB0208.1_Zscan4_2/Jaspar

Match Rank:9
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---GGTCTGTGCAGAG
NNNNTTGTGTGCTTNN
 A C G T A C G T A C G T A C T G C T A G A C G T A G T C A G C T A C T G A C G T A C T G A G T C C G T A C T A G C T G A A C T G
A G C T C G T A C G A T C A G T C A G T C G A T C T A G A G C T A C T G C G A T A C T G A G T C A G C T C G A T A T G C C A T G

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:10
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:GGTCTGTGCAGAG
---CTGTTCCTGG
 A C T G C T A G A C G T A G T C A G C T A C T G A C G T A C T G A G T C C G T A C T A G C T G A A C T G
A C G T A C G T A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G