Information for 13-CTTWAGCABW (Motif 37)

G T A C C G A T A G C T C G T A C G T A T C A G T G A C C G T A A C T G C G A T
Reverse Opposite:
G C T A T G A C C G A T A C T G A G T C A C G T C G A T C T G A C G T A A C T G
p-value:1e-5
log p-value:-1.254e+01
Information Content per bp:1.668
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif3.53%
Number of Background Sequences with motif528.4
Percentage of Background Sequences with motif1.12%
Average Position of motif in Targets44.0 +/- 27.4bp
Average Position of motif in Background50.1 +/- 30.2bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXP3/MA0850.1/Jaspar

Match Rank:1
Score:0.65
Offset:1
Orientation:forward strand
Alignment:CTTWAGCABW
-GTAAACA--
 G T A C C G A T A G C T C G T A C G T A T C A G T G A C C G T A A C T G C G A T
A C G T C T A G G A C T C G T A C T G A T C G A A G T C C T G A A C G T A C G T

MF0005.1_Forkhead_class/Jaspar

Match Rank:2
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-CTTWAGCABW
AAATAAACA--
 A C G T G T A C C G A T A G C T C G T A C G T A T C A G T G A C C G T A A C T G C G A T
T C G A G T C A T C G A G A C T G T C A C T G A T C G A G A T C C G T A A C G T A C G T

Foxq1/MA0040.1/Jaspar

Match Rank:3
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CTTWAGCABW-
AATAAACAATN
 G T A C C G A T A G C T C G T A C G T A T C A G T G A C C G T A A C T G C G A T A C G T
G C T A T G C A A G C T C G T A C G T A C G T A A G T C C G T A C G T A A G C T C G T A

FOXL1/MA0033.2/Jaspar

Match Rank:4
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CTTWAGCABW
-GTAAACA--
 G T A C C G A T A G C T C G T A C G T A T C A G T G A C C G T A A C T G C G A T
A C G T C T A G G A C T T G C A G T C A T G C A A G T C G T C A A C G T A C G T

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:5
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CTTWAGCABW
TCATCAATCA--
 A C G T A C G T G T A C C G A T A G C T C G T A C G T A T C A G T G A C C G T A A C T G C G A T
G A C T G T A C T G C A A C G T G A T C G C T A T C G A A C G T A G T C C G T A A C G T A C G T

POU3F2/MA0787.1/Jaspar

Match Rank:6
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CTTWAGCABW-
TAATTTGCATAA
 A C G T G T A C C G A T A G C T C G T A C G T A T C A G T G A C C G T A A C T G C G A T A C G T
C G A T T G C A G C T A C G A T G C A T C G A T T C A G G T A C C T G A A G C T C G T A G C T A

POU3F1/MA0786.1/Jaspar

Match Rank:7
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CTTWAGCABW-
TAATTTGCATAA
 A C G T G T A C C G A T A G C T C G T A C G T A T C A G T G A C C G T A A C T G C G A T A C G T
C G A T G T C A G C T A G C A T G C A T G C A T T C A G G T A C C T G A G A C T C G T A G C T A

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:8
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CTTWAGCABW
BTVATTWGCATA
 A C G T A C G T G T A C C G A T A G C T C G T A C G T A T C A G T G A C C G T A A C T G C G A T
A G T C C A G T T G C A G T C A A C G T A G C T C G A T T C A G G T A C C G T A A C G T C T G A

FOXG1/MA0613.1/Jaspar

Match Rank:9
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CTTWAGCABW
-GTAAACAA-
 G T A C C G A T A G C T C G T A C G T A T C A G T G A C C G T A A C T G C G A T
A C G T C T A G A C G T C G T A C G T A C G T A A G T C C G T A G C T A A C G T

POU3F3/MA0788.1/Jaspar

Match Rank:10
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CTTWAGCABW--
AAATTAGCATAAT
 A C G T G T A C C G A T A G C T C G T A C G T A T C A G T G A C C G T A A C T G C G A T A C G T A C G T
G C T A G C T A C G T A G A C T G C A T C G T A T C A G G T A C T G C A G C A T G C T A G C T A G C A T