Information for 23-GAGGAAAAACAACGAA (Motif 35)

A C T G C G T A C T A G A C T G C G T A C T G A C G T A G T C A C G T A A G T C C G T A G T C A A G T C A C T G C G T A G T C A
Reverse Opposite:
A C G T A C G T A G T C C T A G A C G T A C G T A C T G A C G T A C G T A C G T A G C T A C G T G T A C A G T C A C G T A G T C
p-value:1e-6
log p-value:-1.479e+01
Information Content per bp:1.851
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.48%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets45.7 +/- 32.8bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox6/MA0515.1/Jaspar

Match Rank:1
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:GAGGAAAAACAACGAA
-----AAAACAATGG-
 A C T G C G T A C T A G A C T G C G T A C T G A C G T A G T C A C G T A A G T C C G T A G T C A A G T C A C T G C G T A G T C A
A C G T A C G T A C G T A C G T A C G T T C G A C T G A T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G A C G T

PB0061.1_Sox11_1/Jaspar

Match Rank:2
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GAGGAAAAACAACGAA---
--ATAAGAACAAAGGACTA
 A C T G C G T A C T A G A C T G C G T A C T G A C G T A G T C A C G T A A G T C C G T A G T C A A G T C A C T G C G T A G T C A A C G T A C G T A C G T
A C G T A C G T G C T A A C G T C G T A C G T A C T A G T C G A C G T A A G T C C G T A G T C A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

SOX10/MA0442.1/Jaspar

Match Rank:3
Score:0.58
Offset:8
Orientation:reverse strand
Alignment:GAGGAAAAACAACGAA
--------ACAAAG--
 A C T G C G T A C T A G A C T G C G T A C T G A C G T A G T C A C G T A A G T C C G T A G T C A A G T C A C T G C G T A G T C A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A A T G C C G T A T G C A C G T A C T A G A C G T A C G T

PB0071.1_Sox4_1/Jaspar

Match Rank:4
Score:0.57
Offset:2
Orientation:forward strand
Alignment:GAGGAAAAACAACGAA---
--AGAAGAACAAAGGACTA
 A C T G C G T A C T A G A C T G C G T A C T G A C G T A G T C A C G T A A G T C C G T A G T C A A G T C A C T G C G T A G T C A A C G T A C G T A C G T
A C G T A C G T G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:5
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:GAGGAAAAACAACGAA
-----VRRACAAWGG-
 A C T G C G T A C T A G A C T G C G T A C T G A C G T A G T C A C G T A A G T C C G T A G T C A A G T C A C T G C G T A G T C A
A C G T A C G T A C G T A C G T A C G T T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G A C G T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:6
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:GAGGAAAAACAACGAA
-----RNAACAATGG-
 A C T G C G T A C T A G A C T G C G T A C T G A C G T A G T C A C G T A A G T C C G T A G T C A A G T C A C T G C G T A G T C A
A C G T A C G T A C G T A C G T A C G T T C G A T C A G T C G A T C G A A T G C C G T A T C G A G C A T C A T G T A C G A C G T

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:7
Score:0.55
Offset:6
Orientation:forward strand
Alignment:GAGGAAAAACAACGAA
------RAACAATGGN
 A C T G C G T A C T A G A C T G C G T A C T G A C G T A G T C A C G T A A G T C C G T A G T C A A G T C A C T G C G T A G T C A
A C G T A C G T A C G T A C G T A C G T A C G T C T G A T C G A C G T A A T G C C G T A C G T A C G A T C T A G T C A G G A T C

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:8
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:GAGGAAAAACAACGAA
-----VRAACAATGG-
 A C T G C G T A C T A G A C T G C G T A C T G A C G T A G T C A C G T A A G T C C G T A G T C A A G T C A C T G C G T A G T C A
A C G T A C G T A C G T A C G T A C G T T G A C C T G A T C G A C G T A T A G C G T C A T C G A G C A T C T A G T A C G A C G T

FOXP1/MA0481.1/Jaspar

Match Rank:9
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---GAGGAAAAACAACGAA
CAAAAGTAAACAAAG----
 A C G T A C G T A C G T A C T G C G T A C T A G A C T G C G T A C T G A C G T A G T C A C G T A A G T C C G T A G T C A A G T C A C T G C G T A G T C A
G T A C G C T A C G T A T C G A C T G A T C A G G C A T C G T A C G T A C G T A T G A C C G T A T G C A C G T A T C A G A C G T A C G T A C G T A C G T

PB0070.1_Sox30_1/Jaspar

Match Rank:10
Score:0.54
Offset:3
Orientation:forward strand
Alignment:GAGGAAAAACAACGAA---
---AATGAACAATGGAATT
 A C T G C G T A C T A G A C T G C G T A C T G A C G T A G T C A C G T A A G T C C G T A G T C A A G T C A C T G C G T A G T C A A C G T A C G T A C G T
A C G T A C G T A C G T C T G A G C A T C A G T A T C G T C G A C G T A A G T C G C T A C T G A C G A T C A T G T C A G G C T A G T C A G A C T G A C T