p-value: | 1e-7 |
log p-value: | -1.774e+01 |
Information Content per bp: | 1.873 |
Number of Target Sequences with motif | 4.0 |
Percentage of Target Sequences with motif | 0.64% |
Number of Background Sequences with motif | 2.7 |
Percentage of Background Sequences with motif | 0.01% |
Average Position of motif in Targets | 39.2 +/- 22.3bp |
Average Position of motif in Background | 59.0 +/- 0.0bp |
Strand Bias (log2 ratio + to - strand density) | 2.0 |
Multiplicity (# of sites on avg that occur together) | 1.25 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer
Match Rank: | 1 |
Score: | 0.67 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -CACAGMRCGGSWC- DCHCAGCAGGRGGCC |
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PB0207.1_Zic3_2/Jaspar
Match Rank: | 2 |
Score: | 0.66 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---CACAGMRCGGSWC GAGCACAGCAGGACA- |
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PB0206.1_Zic2_2/Jaspar
Match Rank: | 3 |
Score: | 0.65 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---CACAGMRCGGSWC CCACACAGCAGGAGA- |
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PB0205.1_Zic1_2/Jaspar
Match Rank: | 4 |
Score: | 0.65 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---CACAGMRCGGSWC CCACACAGCAGGAGA- |
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Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer
Match Rank: | 5 |
Score: | 0.65 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | CACAGMRCGGSWC CACAGCAGGGGG- |
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POL009.1_DCE_S_II/Jaspar
Match Rank: | 6 |
Score: | 0.64 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | CACAGMRCGGSWC CACAGN------- |
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Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer
Match Rank: | 7 |
Score: | 0.62 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -CACAGMRCGGSWC DCTCAGCAGG---- |
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ZIC1/MA0696.1/Jaspar
Match Rank: | 8 |
Score: | 0.60 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | CACAGMRCGGSWC- CACAGCGGGGGGTC |
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PB0199.1_Zfp161_2/Jaspar
Match Rank: | 9 |
Score: | 0.58 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---CACAGMRCGGSWC NNGCNCTGCGCGGC-- |
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POL011.1_XCPE1/Jaspar
Match Rank: | 10 |
Score: | 0.56 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | CACAGMRCGGSWC- ----GGGCGGGACC |
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