Information for 17-AAAATACATCTTT (Motif 22)

C T G A G T C A C G T A C G T A A C G T C G T A G T A C C G T A A C G T A G T C A C G T A C G T A G C T
Reverse Opposite:
C T G A C G T A C G T A A C T G C G T A A C G T A C T G A C G T C G T A A C G T A C G T A C G T A G C T
p-value:1e-8
log p-value:-2.051e+01
Information Content per bp:1.934
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.64%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets50.5 +/- 22.1bp
Average Position of motif in Background77.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0082.1_Irx2/Jaspar

Match Rank:1
Score:0.59
Offset:0
Orientation:forward strand
Alignment:AAAATACATCTTT----
TAAATACATGTAAAATT
 C T G A G T C A C G T A C G T A A C G T C G T A G T A C C G T A A C G T A G T C A C G T A C G T A G C T A C G T A C G T A C G T A C G T
C G A T C G T A C G T A C T G A C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A C G T A C T G A C G T A A C G T G C A T

PH0086.1_Irx5/Jaspar

Match Rank:2
Score:0.59
Offset:0
Orientation:forward strand
Alignment:AAAATACATCTTT----
AATATACATGTAAAATT
 C T G A G T C A C G T A C G T A A C G T C G T A G T A C C G T A A C G T A G T C A C G T A C G T A G C T A C G T A C G T A C G T A C G T
C G A T C G T A C G A T G C T A C G A T G C T A A G T C C G T A G C A T T C A G C G A T G C T A G T C A C G T A C G T A A C G T C G A T

PH0087.1_Irx6/Jaspar

Match Rank:3
Score:0.58
Offset:0
Orientation:forward strand
Alignment:AAAATACATCTTT----
AAAATACATGTAAAAAT
 C T G A G T C A C G T A C G T A A C G T C G T A G T A C C G T A A C G T A G T C A C G T A C G T A G C T A C G T A C G T A C G T A C G T
G C T A G C T A G C T A C T G A C G A T C G T A A G T C C G T A G C A T C T A G C G A T G C T A G T C A C G T A C G T A G C T A C G A T

MEF2C/MA0497.1/Jaspar

Match Rank:4
Score:0.58
Offset:-6
Orientation:forward strand
Alignment:------AAAATACATCTTT
ATGCTAAAAATAGAA----
 A C G T A C G T A C G T A C G T A C G T A C G T C T G A G T C A C G T A C G T A A C G T C G T A G T A C C G T A A C G T A G T C A C G T A C G T A G C T
C T G A C G A T C A T G G T A C A G C T G C T A C T G A C T G A C G T A C G T A G A C T C T G A T C A G G T C A G C T A A C G T A C G T A C G T A C G T

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer

Match Rank:5
Score:0.58
Offset:0
Orientation:forward strand
Alignment:AAAATACATCTTT
GYCATCMATCAT-
 C T G A G T C A C G T A C G T A A C G T C G T A G T A C C G T A A C G T A G T C A C G T A C G T A G C T
T A C G G A C T T G A C C G T A A C G T G A T C G T C A C G T A A C G T A T G C C G T A G A C T A C G T

PH0084.1_Irx3_2/Jaspar

Match Rank:6
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-AAAATACATCTTT---
NNTATTACATGTANNNT
 A C G T C T G A G T C A C G T A C G T A A C G T C G T A G T A C C G T A A C G T A G T C A C G T A C G T A G C T A C G T A C G T A C G T
G C A T C T G A G C A T G C T A A C G T C G A T C G T A G A T C C G T A G C A T C T A G C G A T G C T A C G A T G C T A G C A T G C A T

PH0044.1_Homez/Jaspar

Match Rank:7
Score:0.57
Offset:2
Orientation:forward strand
Alignment:AAAATACATCTTT------
--AAAACATCGTTTTTAAG
 C T G A G T C A C G T A C G T A A C G T C G T A G T A C C G T A A C G T A G T C A C G T A C G T A G C T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G T A G C A T G C T A G C T A T G A C G C T A A C G T G T A C A C T G C G A T C G A T G C A T G A C T A G C T G C T A C T G A C T A G

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----AAAATACATCTTT
DCYAAAAATAGM-----
 A C G T A C G T A C G T A C G T C T G A G T C A C G T A C G T A A C G T C G T A G T A C C G T A A C G T A G T C A C G T A C G T A G C T
C A T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G A C T C T G A T C A G G T A C A C G T A C G T A C G T A C G T A C G T

PH0083.1_Irx3_1/Jaspar

Match Rank:9
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-AAAATACATCTTT---
ANTATTACATGTANNNN
 A C G T C T G A G T C A C G T A C G T A A C G T C G T A G T A C C G T A A C G T A G T C A C G T A C G T A G C T A C G T A C G T A C G T
G C T A C T A G G C A T G C T A A C G T C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A A G C T G C A T G A C T G C A T

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:10
Score:0.56
Offset:2
Orientation:forward strand
Alignment:AAAATACATCTTT
--AAGATATCCTT
 C T G A G T C A C G T A C G T A A C G T C G T A G T A C C G T A A C G T A G T C A C G T A C G T A G C T
A C G T A C G T G C T A G C T A T C A G C G T A A C G T C T G A C G A T A T G C G A T C G C A T A G C T