Information for 15-RAGTGTTCCCYMM (Motif 21)

C T A G C G T A C T A G A C G T A C T G A C G T A C G T G T A C A G T C A G T C A G T C G T A C G T C A
Reverse Opposite:
A C G T A C T G C T A G A C T G A C T G A C T G C G T A C G T A A G T C C G T A A G T C A C G T A G T C
p-value:1e-9
log p-value:-2.098e+01
Information Content per bp:1.873
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.80%
Number of Background Sequences with motif3.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets31.5 +/- 23.3bp
Average Position of motif in Background37.1 +/- 16.6bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.64
Offset:0
Orientation:forward strand
Alignment:RAGTGTTCCCYMM
CNGTCCTCCC---
 C T A G C G T A C T A G A C G T A C T G A C G T A C G T G T A C A G T C A G T C A G T C G T A C G T C A
A T G C T C G A T A C G A C G T A T G C A G T C A C G T A G T C A G T C G A T C A C G T A C G T A C G T

PB0099.1_Zfp691_1/Jaspar

Match Rank:2
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----RAGTGTTCCCYMM
CGAACAGTGCTCACTAT
 A C G T A C G T A C G T A C G T C T A G C G T A C T A G A C G T A C T G A C G T A C G T G T A C A G T C A G T C A G T C G T A C G T C A
A G T C C A T G G C T A T C G A G A T C T C G A A C T G C G A T C T A G G T A C A G C T A G T C T G C A A G T C G C A T C T G A C G A T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:3
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:RAGTGTTCCCYMM
--CTGTTCCTGG-
 C T A G C G T A C T A G A C G T A C T G A C G T A C G T G T A C A G T C A G T C A G T C G T A C G T C A
A C G T A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G A C G T

MZF1/MA0056.1/Jaspar

Match Rank:4
Score:0.61
Offset:6
Orientation:reverse strand
Alignment:RAGTGTTCCCYMM
------TCCCCA-
 C T A G C G T A C T A G A C G T A C T G A C G T A C G T G T A C A G T C A G T C A G T C G T A C G T C A
A C G T A C G T A C G T A C G T A C G T A C G T A G C T A G T C G T A C A G T C G T A C T C G A A C G T

PB0156.1_Plagl1_2/Jaspar

Match Rank:5
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-RAGTGTTCCCYMM---
NNNNGGTACCCCCCANN
 A C G T C T A G C G T A C T A G A C G T A C T G A C G T A C G T G T A C A G T C A G T C A G T C G T A C G T C A A C G T A C G T A C G T
G C T A C T G A C T A G C A T G C A T G C A T G G A C T C G T A A G T C T A G C A G T C A G T C G A T C G A T C C G T A T A C G G A T C

PB0173.1_Sox21_2/Jaspar

Match Rank:6
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----RAGTGTTCCCYMM
AATCAATTGTTCCGCTA
 A C G T A C G T A C G T A C G T C T A G C G T A C T A G A C G T A C T G A C G T A C G T G T A C A G T C A G T C A G T C G T A C G T C A
T G A C T C A G A G C T A T G C G C T A C G T A A G C T C G A T A T C G C G A T A G C T A T G C T G A C A C T G G A T C C A G T T C G A

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:7
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--RAGTGTTCCCYMM
TTRAGTGSYK-----
 A C G T A C G T C T A G C G T A C T A G A C G T A C T G A C G T A C G T G T A C A G T C A G T C A G T C G T A C G T C A
A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T A C G T A C G T A C G T A C G T A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:8
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--RAGTGTTCCCYMM
TTGAGTGSTT-----
 A C G T A C G T C T A G C G T A C T A G A C G T A C T G A C G T A C G T G T A C A G T C A G T C A G T C G T A C G T C A
G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T A C G T A C G T A C G T A C G T A C G T

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:9
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--RAGTGTTCCCYMM
TTAAGTGCTT-----
 A C G T A C G T C T A G C G T A C T A G A C G T A C T G A C G T A C G T G T A C A G T C A G T C A G T C G T A C G T C A
A C G T C A G T T C G A C G T A A C T G A C G T C T A G A T G C A G C T A G C T A C G T A C G T A C G T A C G T A C G T

PB0072.1_Sox5_1/Jaspar

Match Rank:10
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----RAGTGTTCCCYMM
NNTTTATTGTTCTNNN-
 A C G T A C G T A C G T A C G T C T A G C G T A C T A G A C G T A C T G A C G T A C G T G T A C A G T C A G T C A G T C G T A C G T C A
G C T A C G A T G C A T G A C T G C A T C G T A G A C T G C A T C T A G G A C T A G C T G A T C G A C T G C T A C G T A G C T A A C G T