Information for 12-GKRCACARACTYC (Motif 18)

A C T G A C T G C T A G A G T C C G T A A G T C C G T A C T A G C G T A A G T C A C G T A G C T A G T C
Reverse Opposite:
A C T G C T G A C G T A A C T G A C G T G A C T A C G T A C T G A C G T A C T G A G T C G T A C A G T C
p-value:1e-9
log p-value:-2.299e+01
Information Content per bp:1.879
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.80%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets44.8 +/- 16.5bp
Average Position of motif in Background50.8 +/- 18.1bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-GKRCACARACTYC
RGGGCACTAACY--
 A C G T A C T G A C T G C T A G A G T C C G T A A G T C C G T A C T A G C G T A A G T C A C G T A G C T A G T C
T C G A C A T G C A T G T A C G G T A C T C G A A G T C C A G T C T G A C G T A A G T C G A C T A C G T A C G T

PB0026.1_Gm397_1/Jaspar

Match Rank:2
Score:0.68
Offset:-5
Orientation:forward strand
Alignment:-----GKRCACARACTYC
CAGATGTGCACATACGT-
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G C T A G A G T C C G T A A G T C C G T A C T A G C G T A A G T C A C G T A G C T A G T C
G T A C G C T A C A T G C G T A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A A G C T G T C A G T A C C A T G G A C T A C G T

PB0130.1_Gm397_2/Jaspar

Match Rank:3
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GKRCACARACTYC-
AGCGGCACACACGCAA
 A C G T A C G T A C T G A C T G C T A G A G T C C G T A A G T C C G T A C T A G C G T A A G T C A C G T A G C T A G T C A C G T
C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A

PB0104.1_Zscan4_1/Jaspar

Match Rank:4
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----GKRCACARACTYC
TACATGTGCACATAAAA-
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G C T A G A G T C C G T A A G T C C G T A C T A G C G T A A G T C A C G T A G C T A G T C
C A G T G T C A T G A C C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A A G C T G C T A G C T A C G T A G T C A A C G T

PB0133.1_Hic1_2/Jaspar

Match Rank:5
Score:0.55
Offset:-6
Orientation:reverse strand
Alignment:------GKRCACARACTYC
NNNNTTGGGCACNNCN---
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G C T A G A G T C C G T A A G T C C G T A C T A G C G T A A G T C A C G T A G C T A G T C
A G T C G A T C C A G T G C A T G C A T C A G T A C T G A C T G A C T G A G T C C G T A G A T C G T C A G T A C T A G C G T A C A C G T A C G T A C G T

NR3C2/MA0727.1/Jaspar

Match Rank:6
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--GKRCACARACTYC--
GGGAACACAATGTTCCC
 A C G T A C G T A C T G A C T G C T A G A G T C C G T A A G T C C G T A C T A G C G T A A G T C A C G T A G C T A G T C A C G T A C G T
C A T G C T A G C A T G C G T A T G C A A T G C C T G A G A T C C G T A C T G A G A C T A T C G G A C T G C A T G A T C A G T C G T A C

GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer

Match Rank:7
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:GKRCACARACTYC--
GRACAGWMTGTYCTB
 A C T G A C T G C T A G A G T C C G T A A G T C C G T A C T A G C G T A A G T C A C G T A G C T A G T C A C G T A C G T
C T A G C T G A C T G A T A G C C G T A A T C G C G T A T G C A G A C T T C A G G C A T G A C T G A T C G A C T A C T G

HNF4G/MA0484.1/Jaspar

Match Rank:8
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GKRCACARACTYC-
AGAGTCCAAAGTCCA
 A C G T A C T G A C T G C T A G A G T C C G T A A G T C C G T A C T A G C G T A A G T C A C G T A G C T A G T C A C G T
C G T A T C A G C T G A C T A G C A G T A G T C A G T C T G C A T C G A C T G A C A T G C A G T A G T C G A T C G C T A

PB0208.1_Zscan4_2/Jaspar

Match Rank:9
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----GKRCACARACTYC
CGAAGCACACAAAATA-
 A C G T A C G T A C G T A C G T A C T G A C T G C T A G A G T C C G T A A G T C C G T A C T A G C G T A A G T C A C G T A G C T A G T C
G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A A C G T

PB0016.1_Foxj1_1/Jaspar

Match Rank:10
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---GKRCACARACTYC
AAAGTAAACAAAAATT
 A C G T A C G T A C G T A C T G A C T G C T A G A G T C C G T A A G T C C G T A C T A G C G T A A G T C A C G T A G C T A G T C
G C T A C G A T G C T A C T A G G A C T G T C A G C T A C G T A G A T C C G T A G T C A C G T A G T C A C G T A C A G T C A G T