Information for 7-AGGAGCTCAGCBGCCA (Motif 11)

C G T A A C T G T C A G C G T A A C T G A T G C A C G T G T A C C G T A A T C G A G T C A C G T A C T G T A G C A G T C C T G A
Reverse Opposite:
A G C T C T A G A T C G G T A C T G C A A C T G A T G C A C G T A C T G G T C A A T C G G T A C A C G T A G T C G T A C C G A T
p-value:1e-13
log p-value:-3.051e+01
Information Content per bp:1.712
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.76%
Number of Background Sequences with motif24.9
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets60.1 +/- 21.9bp
Average Position of motif in Background48.2 +/- 31.2bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NHLH1/MA0048.2/Jaspar

Match Rank:1
Score:0.57
Offset:5
Orientation:forward strand
Alignment:AGGAGCTCAGCBGCCA
-----CGCAGCTGCG-
 C G T A A C T G T C A G C G T A A C T G A T G C A C G T G T A C C G T A A T C G A G T C A C G T A C T G T A G C A G T C C T G A
A C G T A C G T A C G T A C G T A C G T T G A C T C A G G T A C T G C A A T C G T A G C A C G T T A C G G A T C A C T G A C G T

c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.56
Offset:0
Orientation:forward strand
Alignment:AGGAGCTCAGCBGCCA
ATGACGTCATCN----
 C G T A A C T G T C A G C G T A A C T G A T G C A C G T G T A C C G T A A T C G A G T C A C G T A C T G T A G C A G T C C T G A
T C G A G C A T A C T G C T G A A G T C T C A G G A C T G T A C C G T A A G C T A G T C G A T C A C G T A C G T A C G T A C G T

Myog/MA0500.1/Jaspar

Match Rank:3
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:AGGAGCTCAGCBGCCA
----NNGCAGCTGTC-
 C G T A A C T G T C A G C G T A A C T G A T G C A C G T G T A C C G T A A T C G A G T C A C G T A C T G T A G C A G T C C T G A
A C G T A C G T A C G T A C G T A T G C G A C T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:4
Score:0.56
Offset:2
Orientation:forward strand
Alignment:AGGAGCTCAGCBGCCA
--AAGGTCAC------
 C G T A A C T G T C A G C G T A A C T G A T G C A C G T G T A C C G T A A T C G A G T C A C G T A C T G T A G C A G T C C T G A
A C G T A C G T C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C A C G T A C G T A C G T A C G T A C G T A C G T

Myod1/MA0499.1/Jaspar

Match Rank:5
Score:0.55
Offset:5
Orientation:forward strand
Alignment:AGGAGCTCAGCBGCCA--
-----TGCAGCTGTCCCT
 C G T A A C T G T C A G C G T A A C T G A T G C A C G T G T A C C G T A A T C G A G T C A C G T A C T G T A G C A G T C C T G A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C A T T A C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C T A G C A G T C A G C T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.55
Offset:6
Orientation:forward strand
Alignment:AGGAGCTCAGCBGCCA
------NCAGCTGCTG
 C G T A A C T G T C A G C G T A A C T G A T G C A C G T G T A C C G T A A T C G A G T C A C G T A C T G T A G C A G T C C T G A
A C G T A C G T A C G T A C G T A C G T A C G T T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G

POL010.1_DCE_S_III/Jaspar

Match Rank:7
Score:0.55
Offset:7
Orientation:forward strand
Alignment:AGGAGCTCAGCBGCCA
-------CAGCC----
 C G T A A C T G T C A G C G T A A C T G A T G C A C G T G T A C C G T A A T C G A G T C A C G T A C T G T A G C A G T C C T G A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:8
Score:0.55
Offset:7
Orientation:reverse strand
Alignment:AGGAGCTCAGCBGCCA
-------CAGCTGNT-
 C G T A A C T G T C A G C G T A A C T G A T G C A C G T G T A C C G T A A T C G A G T C A C G T A C T G T A G C A G T C C T G A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T A C C G T A A C T G T G A C C G A T A C T G A G T C G A C T A C G T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:9
Score:0.54
Offset:5
Orientation:forward strand
Alignment:AGGAGCTCAGCBGCCA-
-----AGCAGCTGCTNN
 C G T A A C T G T C A G C G T A A C T G A T G C A C G T G T A C C G T A A T C G A G T C A C G T A C T G T A G C A G T C C T G A A C G T
A C G T A C G T A C G T A C G T A C G T C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:10
Score:0.54
Offset:1
Orientation:forward strand
Alignment:AGGAGCTCAGCBGCCA
-TRAGGTCA-------
 C G T A A C T G T C A G C G T A A C T G A T G C A C G T G T A C C G T A A T C G A G T C A C G T A C T G T A G C A G T C C T G A
A C G T G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T