Information for 11-GTCATTTTGTTAC (Motif 8)

T A C G C G A T G T A C C G T A A C G T A C G T A C G T C A G T A C T G A C G T A C G T C G T A A G T C
Reverse Opposite:
A C T G C G A T C G T A T C G A A G T C G T C A C G T A C G T A G T C A A C G T A C T G C G T A A T G C
p-value:1e-11
log p-value:-2.662e+01
Information Content per bp:1.823
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.72%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets43.3 +/- 30.9bp
Average Position of motif in Background33.4 +/- 16.4bp
Strand Bias (log2 ratio + to - strand density)-2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0012.1_Cdx1/Jaspar

Match Rank:1
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:GTCATTTTGTTAC----
-NAATTTTATTACCTNN
 T A C G C G A T G T A C C G T A A C G T A C G T A C G T C A G T A C T G A C G T A C G T C G T A A G T C A C G T A C G T A C G T A C G T
A C G T C G A T G T C A T C G A C G A T C G A T C G A T C G A T C G T A A G C T C A G T C T G A A G T C G A T C A C G T G A C T G C T A

PH0046.1_Hoxa10/Jaspar

Match Rank:2
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GTCATTTTGTTAC---
TNAATTTTATTACCTN
 T A C G C G A T G T A C C G T A A C G T A C G T A C G T C A G T A C T G A C G T A C G T C G T A A G T C A C G T A C G T A C G T
G C A T C A T G G T C A C G T A C G A T C G A T G C A T C G A T C G T A G A C T C A G T C T G A A G T C T G A C C A G T G T C A

DMRT3/MA0610.1/Jaspar

Match Rank:3
Score:0.62
Offset:5
Orientation:reverse strand
Alignment:GTCATTTTGTTAC---
-----NTTGATACATT
 T A C G C G A T G T A C C G T A A C G T A C G T A C G T C A G T A C T G A C G T A C G T C G T A A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A C G A T A C G T A C T G G C T A A C G T C G T A A G T C C G T A C G A T A C G T

PH0013.1_Cdx2/Jaspar

Match Rank:4
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GTCATTTTGTTAC----
-NAATTTTATTACCNNN
 T A C G C G A T G T A C C G T A A C G T A C G T A C G T C A G T A C T G A C G T A C G T C G T A A G T C A C G T A C G T A C G T A C G T
A C G T C T G A G T C A C T G A C G A T C G A T C G A T C G A T C G T A A G C T C A G T C T G A A G T C G A T C A C G T A G C T G C A T

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:5
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:GTCATTTTGTTAC
---NTTTTATGAC
 T A C G C G A T G T A C C G T A A C G T A C G T A C G T C A G T A C T G A C G T A C G T C G T A A G T C
A C G T A C G T A C G T C T G A C G A T A C G T A C G T A C G T C G T A A C G T C A T G C T G A A G T C

PB0158.1_Rfx3_2/Jaspar

Match Rank:6
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---GTCATTTTGTTAC-------
ACTGACCCTTGGTTACCACAAAG
 A C G T A C G T A C G T T A C G C G A T G T A C C G T A A C G T A C G T A C G T C A G T A C T G A C G T A C G T C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T G C A A G T C A C G T A T C G G C T A A T G C T A C G A T G C G C A T C G A T T C A G A C T G C G A T C A G T C G T A G A T C T G A C T C G A T G A C T C G A T C G A C G T A A T C G

PB0119.1_Foxa2_2/Jaspar

Match Rank:7
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:GTCATTTTGTTAC----
--NCNTTTGTTATTTNN
 T A C G C G A T G T A C C G T A A C G T A C G T A C G T C A G T A C T G A C G T A C G T C G T A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A T G C A T G C A T C G A G C T C A G T C A G T C T A G G C A T G A C T T C G A C A G T G A C T G C A T A G C T A G C T

PB0159.1_Rfx4_2/Jaspar

Match Rank:8
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GTCATTTTGTTAC---
-TACCCTAGTTACCGA
 T A C G C G A T G T A C C G T A A C G T A C G T A C G T C A G T A C T G A C G T A C G T C G T A A G T C A C G T A C G T A C G T
A C G T G C A T G T C A A T G C A T G C G T A C C A G T T C G A A C T G C G A T A C G T C G T A A G T C T A G C T A C G G T C A

PH0075.1_Hoxd10/Jaspar

Match Rank:9
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GTCATTTTGTTAC---
NTNAATTTTATTGNATT
 A C G T T A C G C G A T G T A C C G T A A C G T A C G T A C G T C A G T A C T G A C G T A C G T C G T A A G T C A C G T A C G T A C G T
C G T A G C A T G C T A G C T A C T G A A G C T C G A T C G A T C G A T C T G A G C A T C A G T C T A G A G T C T G C A G A C T A C G T

PROP1/MA0715.1/Jaspar

Match Rank:10
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GTCATTTTGTTAC
-TAATTAAATTA-
 T A C G C G A T G T A C C G T A A C G T A C G T A C G T C A G T A C T G A C G T A C G T C G T A A G T C
A C G T G C A T C T G A C G T A G A C T C A G T G C T A C T G A C G T A A G C T C G A T C G T A A C G T