Information for 8-GGGTCAGTTTACA (Motif 6)

A C T G A C T G A C T G A G C T A G T C C G T A A C T G C G A T A C G T C G A T C T G A G T A C C G T A
Reverse Opposite:
A C G T A C T G A G C T C G T A C G T A G C T A G T A C C G A T T C A G C T G A G T A C G T A C G T A C
p-value:1e-11
log p-value:-2.709e+01
Information Content per bp:1.780
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.84%
Number of Background Sequences with motif4.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets55.3 +/- 17.3bp
Average Position of motif in Background42.6 +/- 20.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:1
Score:0.70
Offset:0
Orientation:forward strand
Alignment:GGGTCAGTTTACA
GKVTCADRTTWC-
 A C T G A C T G A C T G A G C T A G T C C G T A A C T G C G A T A C G T C G A T C T G A G T A C C G T A
C T A G C A T G T G C A A C G T A G T C C G T A C A T G T C A G A C G T A C G T G C T A A G T C A C G T

Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer

Match Rank:2
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:GGGTCAGTTTACA
GKMTCADRTTWC-
 A C T G A C T G A C T G A G C T A G T C C G T A A C T G C G A T A C G T C G A T C T G A G T A C C G T A
C T A G C A G T T G C A A C G T G A T C T C G A C T A G T C A G A C G T C A G T G C A T G A T C A C G T

FOXP2/MA0593.1/Jaspar

Match Rank:3
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:GGGTCAGTTTACA-
---TNTGTTTACTT
 A C T G A C T G A C T G A G C T A G T C C G T A A C T G C G A T A C G T C G A T C T G A G T A C C G T A A C G T
A C G T A C G T A C G T G A C T A G C T A C G T C T A G A C G T A C G T A C G T C G T A A G T C G C A T G A C T

FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer

Match Rank:4
Score:0.61
Offset:2
Orientation:forward strand
Alignment:GGGTCAGTTTACA-
--NYYTGTTTACHN
 A C T G A C T G A C T G A G C T A G T C C G T A A C T G C G A T A C G T C G A T C T G A G T A C C G T A A C G T
A C G T A C G T A G C T A G T C A G T C A C G T C T A G A C G T A C G T A C G T C G T A A G T C G A T C C G T A

Foxk1/MA0852.1/Jaspar

Match Rank:5
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GGGTCAGTTTACA----
NNNTTTGTTTACATTTN
 A C T G A C T G A C T G A G C T A G T C C G T A A C T G C G A T A C G T C G A T C T G A G T A C C G T A A C G T A C G T A C G T A C G T
T A G C A G C T A T C G G C A T C G A T A C G T C T A G A C G T C G A T A C G T C G T A A G T C G T C A G C A T G C A T G A C T G C A T

PB0018.1_Foxk1_1/Jaspar

Match Rank:6
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GGGTCAGTTTACA----
NNNTTTGTTTACATTTN
 A C T G A C T G A C T G A G C T A G T C C G T A A C T G C G A T A C G T C G A T C T G A G T A C C G T A A C G T A C G T A C G T A C G T
T A G C A G C T A T C G G C A T C G A T A C G T C T A G A C G T C G A T A C G T C G T A A G T C G T C A G C A T G C A T G A C T G C A T

Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer

Match Rank:7
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:GGGTCAGTTTACA
-----TGTTTACH
 A C T G A C T G A C T G A G C T A G T C C G T A A C T G C G A T A C G T C G A T C T G A G T A C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C G T A C G T C G T A A G T C G C T A

Foxj3/MA0851.1/Jaspar

Match Rank:8
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GGGTCAGTTTACA----
NNNTTTGTTTACNTTNN
 A C T G A C T G A C T G A G C T A G T C C G T A A C T G C G A T A C G T C G A T C T G A G T A C C G T A A C G T A C G T A C G T A C G T
C A T G A C G T A T C G C G A T C G A T C G A T C T A G C G A T C G A T A C G T C T G A A G T C G A C T G C A T C A G T G A C T C A G T

PB0017.1_Foxj3_1/Jaspar

Match Rank:9
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GGGTCAGTTTACA----
NNNTTTGTTTACNTTNN
 A C T G A C T G A C T G A G C T A G T C C G T A A C T G C G A T A C G T C G A T C T G A G T A C C G T A A C G T A C G T A C G T A C G T
C A T G A C G T A T C G C G A T C G A T C G A T C T A G C G A T C G A T A C G T C T G A A G T C G A C T G C A T C A G T G A C T C A G T

PH0158.1_Rhox11_2/Jaspar

Match Rank:10
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:GGGTCAGTTTACA-------
---TCNCTTTACAGCGNNNT
 A C T G A C T G A C T G A G C T A G T C C G T A A C T G C G A T A C G T C G A T C T G A G T A C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G A T A G T C A T G C G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G G A T C C T A G C A G T G T A C A G T C C G A T