Information for 4-TSTTTGTTCA (Motif 2)

A C G T T A G C A G C T A C G T C G A T A C T G C G A T C A G T G A T C C G T A
Reverse Opposite:
G C A T C T A G G T C A G C T A A G T C C G T A G T C A C T G A A T C G T G C A
p-value:1e-26
log p-value:-6.016e+01
Information Content per bp:1.618
Number of Target Sequences with motif111.0
Percentage of Target Sequences with motif13.26%
Number of Background Sequences with motif1925.7
Percentage of Background Sequences with motif4.11%
Average Position of motif in Targets53.4 +/- 26.1bp
Average Position of motif in Background50.6 +/- 34.9bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0071.1_Sox4_1/Jaspar

Match Rank:1
Score:0.82
Offset:-4
Orientation:reverse strand
Alignment:----TSTTTGTTCA---
TNNTCCTTTGTTCTNNT
 A C G T A C G T A C G T A C G T A C G T T A G C A G C T A C G T C G A T A C T G C G A T C A G T G A T C C G T A A C G T A C G T A C G T
C G A T C G T A T C A G A G C T A G T C A G T C C G A T A C G T C G A T T A C G C G A T A G C T G A T C G C A T G A C T T G A C C A G T

PB0061.1_Sox11_1/Jaspar

Match Rank:2
Score:0.80
Offset:-4
Orientation:reverse strand
Alignment:----TSTTTGTTCA---
NNNTCCTTTGTTCTNNN
 A C G T A C G T A C G T A C G T A C G T T A G C A G C T A C G T C G A T A C T G C G A T C A G T G A T C C G T A A C G T A C G T A C G T
C G A T C G T A T C A G A G C T A G T C G A T C C G A T A C G T C G A T A C T G C G A T A G C T G A T C G C A T G C A T T G C A C G A T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:3
Score:0.80
Offset:0
Orientation:forward strand
Alignment:TSTTTGTTCA
YCTTTGTTCC
 A C G T T A G C A G C T A C G T C G A T A C T G C G A T C A G T G A T C C G T A
A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:4
Score:0.76
Offset:-4
Orientation:forward strand
Alignment:----TSTTTGTTCA---
ATTTCCTTTGATCTATA
 A C G T A C G T A C G T A C G T A C G T T A G C A G C T A C G T C G A T A C T G C G A T C A G T G A T C C G T A A C G T A C G T A C G T
C G T A C G A T C A G T A G C T A G T C A G T C G A C T G A C T C G A T A C T G C G T A C G A T T A G C G C A T C G T A C A G T T G C A

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:5
Score:0.76
Offset:0
Orientation:forward strand
Alignment:TSTTTGTTCA
CCWTTGTYYB
 A C G T T A G C A G C T A C G T C G A T A C T G C G A T C A G T G A T C C G T A
A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G

PB0040.1_Lef1_1/Jaspar

Match Rank:6
Score:0.75
Offset:-4
Orientation:forward strand
Alignment:----TSTTTGTTCA---
AATCCCTTTGATCTATC
 A C G T A C G T A C G T A C G T A C G T T A G C A G C T A C G T C G A T A C T G C G A T C A G T G A T C C G T A A C G T A C G T A C G T
C T A G C T G A C G A T A G T C A G T C A G T C G A C T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T T G A C

Sox3/MA0514.1/Jaspar

Match Rank:7
Score:0.75
Offset:0
Orientation:forward strand
Alignment:TSTTTGTTCA
CCTTTGTTTT
 A C G T T A G C A G C T A C G T C G A T A C T G C G A T C A G T G A T C C G T A
A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T

PB0082.1_Tcf3_1/Jaspar

Match Rank:8
Score:0.74
Offset:-4
Orientation:reverse strand
Alignment:----TSTTTGTTCA---
NNTTCCTTTGATCTANA
 A C G T A C G T A C G T A C G T A C G T T A G C A G C T A C G T C G A T A C T G C G A T C A G T G A T C C G T A A C G T A C G T A C G T
C G A T C G A T C G A T A G C T A G T C A G T C G C A T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T C T G A

SOX10/MA0442.1/Jaspar

Match Rank:9
Score:0.74
Offset:1
Orientation:forward strand
Alignment:TSTTTGTTCA
-CTTTGT---
 A C G T T A G C A G C T A C G T C G A T A C T G C G A T C A G T G A T C C G T A
A C G T A G T C C G A T A C G T A C G T A T C G A C G T A C G T A C G T A C G T

MF0011.1_HMG_class/Jaspar

Match Rank:10
Score:0.73
Offset:2
Orientation:forward strand
Alignment:TSTTTGTTCA
--ATTGTT--
 A C G T T A G C A G C T A C G T C G A T A C T G C G A T C A G T G A T C C G T A
A C G T A C G T G C T A A C G T G A C T C T A G G C A T A G C T A C G T A C G T