Information for 7-AGTAAAAGAATTT (Motif 9)

C G T A A C T G C A G T C G T A C G T A C G T A C G T A A C T G C G T A C G T A A G C T A C G T A G C T
Reverse Opposite:
C T G A C G T A C T G A A C G T A C G T A G T C A C G T A C G T A C G T A C G T G C T A A G T C A C G T
p-value:1e-11
log p-value:-2.680e+01
Information Content per bp:1.935
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.88%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets54.8 +/- 26.9bp
Average Position of motif in Background68.5 +/- 12.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0166.1_Sox12_2/Jaspar

Match Rank:1
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----AGTAAAAGAATTT
AAACAGACAAAGGAAT-
 A C G T A C G T A C G T A C G T C G T A A C T G C A G T C G T A C G T A C G T A C G T A A C T G C G T A C G T A A G C T A C G T A G C T
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T A C G T

PB0165.1_Sox11_2/Jaspar

Match Rank:2
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:AGTAAAAGAATTT-
NNCNNAACAATTNT
 C G T A A C T G C A G T C G T A C G T A C G T A C G T A A C T G C G T A C G T A A G C T A C G T A G C T A C G T
G C A T G A C T A G T C G T C A C G A T C T G A C G T A A G T C C G T A T C G A A G C T G A C T G A C T G C A T

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---AGTAAAAGAATTT
GAAAGTGAAAGT----
 A C G T A C G T A C G T C G T A A C T G C A G T C G T A C G T A C G T A C G T A A C T G C G T A C G T A A G C T A C G T A G C T
T C A G C G T A T G C A C T G A C T A G C G A T C T A G G C T A T C G A C G T A A C T G A G C T A C G T A C G T A C G T A C G T

PB0015.1_Foxa2_1/Jaspar

Match Rank:4
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----AGTAAAAGAATTT
AAAAAGTAAACAAAGAC
 A C G T A C G T A C G T A C G T C G T A A C T G C A G T C G T A C G T A C G T A C G T A A C T G C G T A C G T A A G C T A C G T A G C T
G C T A C G T A G C T A C G T A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A G C T A C G T A T A C G C T G A A G T C

Prop1(Homeobox)/GHFT1-PROP1.biotin-ChIP-Seq(GSE77302)/Homer

Match Rank:5
Score:0.55
Offset:1
Orientation:forward strand
Alignment:AGTAAAAGAATTT
-NTAATBNAATTA
 C G T A A C T G C A G T C G T A C G T A C G T A C G T A A C T G C G T A C G T A A G C T A C G T A G C T
A C G T G T A C G C A T C T G A C G T A G A C T A G C T C A T G T G C A C T G A A C G T G A C T C G T A

TEAD4/MA0809.1/Jaspar

Match Rank:6
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:AGTAAAAGAATTT-
----NTGGAATGTN
 C G T A A C T G C A G T C G T A C G T A C G T A C G T A A C T G C G T A C G T A A G C T A C G T A G C T A C G T
A C G T A C G T A C G T A C G T C T G A G C A T C T A G T C A G G C T A C G T A G C A T A C T G G A C T A C T G

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:7
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---AGTAAAAGAATTT
NCYAATAAAA------
 A C G T A C G T A C G T C G T A A C T G C A G T C G T A C G T A C G T A C G T A A C T G C G T A C G T A A G C T A C G T A G C T
C G A T T A G C G A C T G T C A C G T A A C G T C G T A C G T A C G T A G C T A A C G T A C G T A C G T A C G T A C G T A C G T

PB0067.1_Sox18_1/Jaspar

Match Rank:8
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-AGTAAAAGAATTT--
NNTNANAACAATTNNA
 A C G T C G T A A C T G C A G T C G T A C G T A C G T A C G T A A C T G C G T A C G T A A G C T A C G T A G C T A C G T A C G T
C G A T C A G T G C A T C A G T C G T A T C A G C G T A G C T A A G T C G C T A C G T A C G A T C A G T T C A G C G T A T C G A

PH0075.1_Hoxd10/Jaspar

Match Rank:9
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----AGTAAAAGAATTT
AATGCAATAAAATTTAT-
 A C G T A C G T A C G T A C G T A C G T C G T A A C T G C A G T C G T A C G T A C G T A C G T A A C T G C G T A C G T A A G C T A C G T A G C T
T G C A C T G A A C G T T C A G G A T C G T C A C G T A A G C T C G T A C G T A C G T A T C G A G A C T C G A T C G A T C G T A G C A T A C G T

PB0066.1_Sox17_1/Jaspar

Match Rank:10
Score:0.54
Offset:2
Orientation:forward strand
Alignment:AGTAAAAGAATTT----
--ATAAACAATTAAACA
 C G T A A C T G C A G T C G T A C G T A C G T A C G T A A C T G C G T A C G T A A G C T A C G T A G C T A C G T A C G T A C G T A C G T
A C G T A C G T T G C A C G A T C T G A C G T A C G T A A G T C C G T A C G T A C G A T C G A T T C G A G C T A G C A T G A T C C G T A