Information for 2-GGTCACTGTGACCCTG (Motif 5)

C A T G C A T G A G C T A G T C T G C A A T G C G C A T A T C G C G A T A C T G G C T A G T A C G T A C G A T C C G A T A C T G
Reverse Opposite:
T G A C G C T A C T A G C A T G A C T G C G A T A G T C C G T A T A G C C G T A T A C G A C G T T A C G T C G A G T A C G T A C
p-value:1e-15
log p-value:-3.511e+01
Information Content per bp:1.538
Number of Target Sequences with motif34.0
Percentage of Target Sequences with motif6.01%
Number of Background Sequences with motif471.2
Percentage of Background Sequences with motif1.03%
Average Position of motif in Targets48.6 +/- 22.0bp
Average Position of motif in Background52.2 +/- 31.7bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer

Match Rank:1
Score:0.83
Offset:0
Orientation:reverse strand
Alignment:GGTCACTGTGACCCTG
GGTCANNGTGACCTN-
 C A T G C A T G A G C T A G T C T G C A A T G C G C A T A T C G C G A T A C T G G C T A G T A C G T A C G A T C C G A T A C T G
C A T G C T A G C A G T A G T C C G T A A T G C T A C G T A C G G C A T T C A G G T C A G A T C G T A C G A C T A C G T A C G T

ESR1/MA0112.3/Jaspar

Match Rank:2
Score:0.81
Offset:-2
Orientation:reverse strand
Alignment:--GGTCACTGTGACCCTG
CAGGTCACCGTGACCTT-
 A C G T A C G T C A T G C A T G A G C T A G T C T G C A A T G C G C A T A T C G C G A T A C T G G C T A G T A C G T A C G A T C C G A T A C T G
T G A C T C G A A C T G A T C G A C G T A G T C T C G A A G T C A T G C A C T G A G C T C T A G G T C A A G T C G T A C A G C T G A C T A C G T

ESR2/MA0258.2/Jaspar

Match Rank:3
Score:0.79
Offset:-1
Orientation:forward strand
Alignment:-GGTCACTGTGACCCTG
AGGTCACCCTGACCT--
 A C G T C A T G C A T G A G C T A G T C T G C A A T G C G C A T A T C G C G A T A C T G G C T A G T A C G T A C G A T C C G A T A C T G
C T G A C A T G C T A G A C G T A T G C C G T A A T G C T G A C T A G C G C A T T C A G G T C A G A T C G A T C G A C T A C G T A C G T

PPARG/MA0066.1/Jaspar

Match Rank:4
Score:0.75
Offset:-4
Orientation:reverse strand
Alignment:----GGTCACTGTGACCCTG
AGTAGGTCACNGTGACCTAC
 A C G T A C G T A C G T A C G T C A T G C A T G A G C T A G T C T G C A A T G C G C A T A T C G C G A T A C T G G C T A G T A C G T A C G A T C C G A T A C T G
G C T A A T C G C A G T C T G A C T A G A C T G C A G T A T G C G T C A G A T C T A G C A C T G C A G T A T C G T G C A G A T C A T G C A G C T C G T A A T G C

Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer

Match Rank:5
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---GGTCACTGTGACCCTG
GTAGGTCACTGGGTCA---
 A C G T A C G T A C G T C A T G C A T G A G C T A G T C T G C A A T G C G C A T A T C G C G A T A C T G G C T A G T A C G T A C G A T C C G A T A C T G
A T C G A G C T C T G A C T A G A C T G A C G T G T A C G C T A A T G C A C G T C T A G C A T G T A C G C G A T A T G C C G T A A C G T A C G T A C G T

ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:6
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GGTCACTGTGACCCTG
AGNACAGNCTGTTCTN-
 A C G T C A T G C A T G A G C T A G T C T G C A A T G C G C A T A T C G C G A T A C T G G C T A G T A C G T A C G A T C C G A T A C T G
C T G A C T A G T C G A C G T A A T G C C G T A A T C G C G A T T A G C G C A T A T C G G C A T A G C T G A T C G A C T A G C T A C G T

NR3C2/MA0727.1/Jaspar

Match Rank:7
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GGTCACTGTGACCCTG
GGGAACATTGTGTTCCC-
 A C G T A C G T C A T G C A T G A G C T A G T C T G C A A T G C G C A T A T C G C G A T A C T G G C T A G T A C G T A C G A T C C G A T A C T G
C A T G T C A G C T A G C G T A C T G A A T G C C T G A G A C T G C A T C T A G G A C T A T C G A C G T G C A T G T A C G A T C G T A C A C G T

PB0153.1_Nr2f2_2/Jaspar

Match Rank:8
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:GGTCACTGTGACCCTG----
----NNNNTGACCCGGCGCG
 C A T G C A T G A G C T A G T C T G C A A T G C G C A T A T C G C G A T A C T G G C T A G T A C G T A C G A T C C G A T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G A T T C G A T A G C A T C G A G C T T C A G G T C A G T A C G T A C A G T C T A C G T C A G G T A C A C T G G T A C A C T G

GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GGTCACTGTGACCCTG
NAGNACANNNTGTNCT--
 A C G T A C G T C A T G C A T G A G C T A G T C T G C A A T G C G C A T A T C G C G A T A C T G G C T A G T A C G T A C G A T C C G A T A C T G
T A C G C T G A C T A G T C G A C G T A A G T C C T G A A T C G G C A T T A G C G A C T A C T G A C G T A G C T A G T C G A C T A C G T A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:10
Score:0.57
Offset:8
Orientation:reverse strand
Alignment:GGTCACTGTGACCCTG
--------TGACCT--
 C A T G C A T G A G C T A G T C T G C A A T G C G C A T A T C G C G A T A C T G G C T A G T A C G T A C G A T C C G A T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T A C G T A C G T