Information for 19-ACTAATATAC (Motif 41)

C G T A G T A C A C G T C G T A C G T A A C G T C G T A A C G T C G T A A G T C
Reverse Opposite:
A C T G A C G T C G T A A C G T C G T A C G A T A C G T C G T A A C T G A C G T
p-value:1e-3
log p-value:-8.476e+00
Information Content per bp:1.937
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.53%
Number of Background Sequences with motif9.2
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets60.8 +/- 20.6bp
Average Position of motif in Background50.1 +/- 33.2bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.67
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arid3b/MA0601.1/Jaspar

Match Rank:1
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---ACTAATATAC
NTAATTAATAT--
 A C G T A C G T A C G T C G T A G T A C A C G T C G T A C G T A A C G T C G T A A C G T C G T A A G T C
A C G T A C G T C G T A C G T A C G A T A C G T C G T A C G T A C G A T C G T A A C G T A C G T A C G T

PB0129.1_Glis2_2/Jaspar

Match Rank:2
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----ACTAATATAC
TCTTTANTAATANN-
 A C G T A C G T A C G T A C G T A C G T C G T A G T A C A C G T C G T A C G T A A C G T C G T A A C G T C G T A A G T C
A G C T A G T C C A G T G C A T C G A T C G T A C G A T G A C T G T C A C G T A G A C T T G C A G C A T C G A T A C G T

Arid5a/MA0602.1/Jaspar

Match Rank:3
Score:0.59
Offset:1
Orientation:forward strand
Alignment:ACTAATATAC-----
-CTAATATTGCTAAA
 C G T A G T A C A C G T C G T A C G T A A C G T C G T A A C G T C G T A A G T C A C G T A C G T A C G T A C G T A C G T
A C G T T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

PB0002.1_Arid5a_1/Jaspar

Match Rank:4
Score:0.59
Offset:1
Orientation:forward strand
Alignment:ACTAATATAC-----
-CTAATATTGCTAAA
 C G T A G T A C A C G T C G T A C G T A A C G T C G T A A C G T C G T A A G T C A C G T A C G T A C G T A C G T A C G T
A C G T T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

PB0119.1_Foxa2_2/Jaspar

Match Rank:5
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---ACTAATATAC--
AAAAATAACAAACGG
 A C G T A C G T A C G T C G T A G T A C A C G T C G T A C G T A A C G T C G T A A C G T C G T A A G T C A C G T A C G T
T C G A T C G A C G T A C G T A G T C A A C G T C T G A C G T A G A T C G T C A G C T A C T G A T A G C T A C G A T C G

TBP/MA0108.2/Jaspar

Match Rank:6
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----ACTAATATAC
NNNNNNCTTTTATAN
 A C G T A C G T A C G T A C G T A C G T C G T A G T A C A C G T C G T A C G T A A C G T C G T A A C G T C G T A A G T C
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C

POL012.1_TATA-Box/Jaspar

Match Rank:7
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----ACTAATATAC
NNNNNNCTTTTATAN
 A C G T A C G T A C G T A C G T A C G T C G T A G T A C A C G T C G T A C G T A A C G T C G T A A C G T C G T A A G T C
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C

PB0079.1_Sry_1/Jaspar

Match Rank:8
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-ACTAATATAC-----
NANTATTATAATTNNN
 A C G T C G T A G T A C A C G T C G T A C G T A A C G T C G T A A C G T C G T A A G T C A C G T A C G T A C G T A C G T A C G T
A C T G G C T A G C T A G A C T C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C G A T G T C A C G A T T G C A

PB0198.1_Zfp128_2/Jaspar

Match Rank:9
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---ACTAATATAC-
NNTATANATATACN
 A C G T A C G T A C G T C G T A G T A C A C G T C G T A C G T A A C G T C G T A A C G T C G T A A G T C A C G T
A T C G A C T G G C A T C T G A G C A T C T G A G C A T C T G A G A C T C G T A G A C T C G T A G T A C G T C A

HOXA13/MA0650.1/Jaspar

Match Rank:10
Score:0.58
Offset:1
Orientation:forward strand
Alignment:ACTAATATAC-
-CCAATAAAAA
 C G T A G T A C A C G T C G T A C G T A A C G T C G T A A C G T C G T A A G T C A C G T
A C G T T A G C A G T C G T C A C G T A A C G T G C T A C G T A G T C A T G C A G T C A