Information for 18-CACCATAAATATCCAC (Motif 36)

G T A C C G T A A G T C G T A C C G T A A G C T C G T A C G T A C G T A A C G T C G T A A C G T G T A C A G T C C G T A A G T C
Reverse Opposite:
A C T G A C G T A C T G A C T G C G T A A C G T C G T A A C G T A C G T C G A T C T G A A C G T A C T G A C T G A C G T A C T G
p-value:1e-6
log p-value:-1.499e+01
Information Content per bp:1.921
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.53%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets63.8 +/- 22.5bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.67
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

OCT:OCT(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:1
Score:0.61
Offset:4
Orientation:forward strand
Alignment:CACCATAAATATCCAC---
----ATGAATATTCATGAG
 G T A C C G T A A G T C G T A C C G T A A G C T C G T A C G T A C G T A A C G T C G T A A C G T G T A C A G T C C G T A A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C T A A C G T C T A G G T C A C G T A A C G T C G T A C G A T C A G T A G T C C G T A A C G T C T A G C T G A A T C G

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:2
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CACCATAAATATCCAC
-KCCAAAAATAGC---
 G T A C C G T A A G T C G T A C C G T A A G C T C G T A C G T A C G T A A C G T C G T A A C G T G T A C A G T C C G T A A G T C
A C G T A C T G G T A C G A T C G C T A C G T A C T G A C G T A C G T A G C A T C T G A T C A G G T A C A C G T A C G T A C G T

PH0023.1_Dlx4/Jaspar

Match Rank:3
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CACCATAAATATCCAC
GCGCTATAATTACCGAC
 A C G T G T A C C G T A A G T C G T A C C G T A A G C T C G T A C G T A C G T A A C G T C G T A A C G T G T A C A G T C C G T A A G T C
A C G T G T A C T C A G T G A C C A G T C T G A G A C T C G T A C G T A C G A T A C G T C T G A G T A C G T A C T A C G G C T A G T A C

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CACCATAAATATCCAC
-DCYAAAAATAGM---
 G T A C C G T A A G T C G T A C C G T A A G C T C G T A C G T A C G T A A C G T C G T A A C G T G T A C A G T C C G T A A G T C
A C G T C A T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G A C T C T G A T C A G G T A C A C G T A C G T A C G T

MEF2B/MA0660.1/Jaspar

Match Rank:5
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CACCATAAATATCCAC
-GCTATAAATAGC---
 G T A C C G T A A G T C G T A C C G T A A G C T C G T A C G T A C G T A A C G T C G T A A C G T G T A C A G T C C G T A A G T C
A C G T C T A G G T A C A G C T C G T A G C A T C G T A G C T A C G T A A C G T G C T A T C A G G T A C A C G T A C G T A C G T

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:6
Score:0.59
Offset:4
Orientation:forward strand
Alignment:CACCATAAATATCCAC
----ATGMATATDC--
 G T A C C G T A A G T C G T A C C G T A A G C T C G T A C G T A C G T A A C G T C G T A A C G T G T A C A G T C C G T A A G T C
A C G T A C G T A C G T A C G T G C T A A C G T C T A G G T A C G C T A G A C T C T G A G C A T C A T G G A T C A C G T A C G T

MEF2D/MA0773.1/Jaspar

Match Rank:7
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CACCATAAATATCCAC
-ACTATAAATAGA---
 G T A C C G T A A G T C G T A C C G T A A G C T C G T A C G T A C G T A A C G T C G T A A C G T G T A C A G T C C G T A A G T C
A C G T C T G A G A T C G A C T G T C A C G A T G C T A C G T A G C T A A C G T C T G A T C A G G T C A A C G T A C G T A C G T

OCT:OCT(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer

Match Rank:8
Score:0.58
Offset:3
Orientation:forward strand
Alignment:CACCATAAATATCCAC--
---YATGCATATRCATRT
 G T A C C G T A A G T C G T A C C G T A A G C T C G T A C G T A C G T A A C G T C G T A A C G T G T A C A G T C C G T A A G T C A C G T A C G T
A C G T A C G T A C G T G A T C C G T A G A C T C T A G G A T C C T G A G A C T C T G A G A C T C T A G G A T C C T G A G A C T C T G A G A C T

ZNF354C/MA0130.1/Jaspar

Match Rank:9
Score:0.57
Offset:10
Orientation:forward strand
Alignment:CACCATAAATATCCAC
----------ATCCAC
 G T A C C G T A A G T C G T A C C G T A A G C T C G T A C G T A C G T A A C G T C G T A A C G T G T A C A G T C C G T A A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A G C A T A G T C A G T C C G T A A T G C

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:10
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CACCATAAATATCCAC
NGYCATAAAWCH----
 G T A C C G T A A G T C G T A C C G T A A G C T C G T A C G T A C G T A A C G T C G T A A C G T G T A C A G T C C G T A A G T C
T A C G T C A G G A T C G T A C T C G A G A C T G C T A G C T A G C T A C G T A G A T C G T C A A C G T A C G T A C G T A C G T