Information for 17-GCVCAVAGGGCTCTGT (Motif 32)

A T C G G A T C T G C A A G T C G T C A T C G A C G T A A C T G C T A G A T C G A G T C A G C T A G T C A C G T A C T G C G A T
Reverse Opposite:
C G T A G T A C C G T A C T A G C T G A A C T G A T G C A G T C A G T C A C G T A C G T A C G T A C T G A C G T C T A G A T G C
p-value:1e-7
log p-value:-1.641e+01
Information Content per bp:1.772
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.71%
Number of Background Sequences with motif3.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets53.5 +/- 26.5bp
Average Position of motif in Background29.0 +/- 25.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:1
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:GCVCAVAGGGCTCTGT
--ACAAAGGNBCCT--
 A T C G G A T C T G C A A G T C G T C A T C G A C G T A A C T G C T A G A T C G A G T C A G C T A G T C A C G T A C T G C G A T
A C G T A C G T G C T A T A G C C G T A T C G A C G T A T C A G T A C G T C A G A G T C A G T C G A T C G C A T A C G T A C G T

HNF4G/MA0484.1/Jaspar

Match Rank:2
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---GCVCAVAGGGCTCTGT
AGAGTCCAAAGTCCA----
 A C G T A C G T A C G T A T C G G A T C T G C A A G T C G T C A T C G A C G T A A C T G C T A G A T C G A G T C A G C T A G T C A C G T A C T G C G A T
C G T A T C A G C T G A C T A G C A G T A G T C A G T C T G C A T C G A C T G A C A T G C A G T A G T C G A T C G C T A A C G T A C G T A C G T A C G T

TFAP2C(var.3)/MA0815.1/Jaspar

Match Rank:3
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GCVCAVAGGGCTCTGT
TGCCCTNAGGGCA----
 A C G T A T C G G A T C T G C A A G T C G T C A T C G A C G T A A C T G C T A G A T C G A G T C A G C T A G T C A C G T A C T G C G A T
G C A T A T C G A G T C A G T C A G T C A G C T T A G C T C G A T C A G A C T G A C T G A T G C C G T A A C G T A C G T A C G T A C G T

TFAP2A(var.3)/MA0872.1/Jaspar

Match Rank:4
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GCVCAVAGGGCTCTGT
TGCCCNNAGGGCA----
 A C G T A T C G G A T C T G C A A G T C G T C A T C G A C G T A A C T G C T A G A T C G A G T C A G C T A G T C A C G T A C T G C G A T
G C A T A T C G A G T C A G T C A G T C A G C T T A G C T C G A T C A G A C T G A C T G A T G C C G T A A C G T A C G T A C G T A C G T

TFAP2B(var.3)/MA0813.1/Jaspar

Match Rank:5
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GCVCAVAGGGCTCTGT
TGCCCTNAGGGCA----
 A C G T A T C G G A T C T G C A A G T C G T C A T C G A C G T A A C T G C T A G A T C G A G T C A G C T A G T C A C G T A C T G C G A T
G C A T A T C G A G T C A G T C A G T C A G C T T G A C T C G A T C A G A C T G A C T G A T G C C G T A A C G T A C G T A C G T A C G T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:6
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----GCVCAVAGGGCTCTGT
CANAGNNCAAAGTCCA----
 A C G T A C G T A C G T A C G T A T C G G A T C T G C A A G T C G T C A T C G A C G T A A C T G C T A G A T C G A G T C A G C T A G T C A C G T A C T G C G A T
G T A C G C T A T C A G C T G A C T A G C A T G A G C T G A T C T G C A T C G A C T G A A C T G C A G T A G T C G A T C G C T A A C G T A C G T A C G T A C G T

SOX10/MA0442.1/Jaspar

Match Rank:7
Score:0.53
Offset:10
Orientation:forward strand
Alignment:GCVCAVAGGGCTCTGT
----------CTTTGT
 A T C G G A T C T G C A A G T C G T C A T C G A C G T A A C T G C T A G A T C G A G T C A G C T A G T C A C G T A C T G C G A T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G A T A C G T A C G T A T C G A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:GCVCAVAGGGCTCTGT
----CNAGGCCT----
 A T C G G A T C T G C A A G T C G T C A T C G A C G T A A C T G C T A G A T C G A G T C A G C T A G T C A C G T A C T G C G A T
A C G T A C G T A C G T A C G T A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T A C G T A C G T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:9
Score:0.53
Offset:9
Orientation:forward strand
Alignment:GCVCAVAGGGCTCTGT---
---------CCWTTGTYYB
 A T C G G A T C T G C A A G T C G T C A T C G A C G T A A C T G C T A G A T C G A G T C A G C T A G T C A C G T A C T G C G A T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:10
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--GCVCAVAGGGCTCTGT
TAGGGCAAAGGTCA----
 A C G T A C G T A T C G G A T C T G C A A G T C G T C A T C G A C G T A A C T G C T A G A T C G A G T C A G C T A G T C A C G T A C T G C G A T
A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A A C G T A C G T A C G T A C G T