Information for 13-TGTGGTTGATTGATTC (Motif 29)

A C G T A C T G A C G T A C T G A T C G G C A T A C G T A C T G C G T A A G C T A C G T A C T G C G T A A C G T A C G T A G T C
Reverse Opposite:
C T A G C G T A C G T A A C G T A G T C C G T A C T G A A C G T G T A C C G T A C G T A A T G C A G T C C G T A G T A C C G T A
p-value:1e-9
log p-value:-2.078e+01
Information Content per bp:1.920
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.71%
Number of Background Sequences with motif0.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets48.8 +/- 34.3bp
Average Position of motif in Background70.0 +/- 15.7bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PBX1/MA0070.1/Jaspar

Match Rank:1
Score:0.68
Offset:4
Orientation:reverse strand
Alignment:TGTGGTTGATTGATTC
----TTTGATTGATGN
 A C G T A C T G A C G T A C T G A T C G G C A T A C G T A C T G C G T A A G C T A C G T A C T G C G T A A C G T A C G T A G T C
A C G T A C G T A C G T A C G T C G A T G C A T C A G T A C T G G T C A C G A T A C G T A C T G C G T A A C G T A C T G C A T G

PB0144.1_Lef1_2/Jaspar

Match Rank:2
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:TGTGGTTGATTGATTC--
--NNANTGATTGATNTTN
 A C G T A C T G A C G T A C T G A T C G G C A T A C G T A C T G C G T A A G C T A C G T A C T G C G T A A C G T A C G T A G T C A C G T A C G T
A C G T A C G T G C A T C G T A T C G A C A T G G A C T C T A G G T C A G A C T C G A T T A C G C G T A C G A T A T G C A G C T G C A T A T G C

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:3
Score:0.66
Offset:8
Orientation:reverse strand
Alignment:TGTGGTTGATTGATTC--
--------ATTGATTYND
 A C G T A C T G A C G T A C T G A T C G G C A T A C G T A C T G C G T A A G C T A C G T A C T G C G T A A C G T A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A G C T A T C G G T C A A G C T G A C T A G C T T G A C C G A T

PB0188.1_Tcf7l2_2/Jaspar

Match Rank:4
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:TGTGGTTGATTGATTC--
--NNANTGATTGATNNNN
 A C G T A C T G A C G T A C T G A T C G G C A T A C G T A C T G C G T A A G C T A C G T A C T G C G T A A C G T A C G T A G T C A C G T A C G T
A C G T A C G T G C A T C G A T T G C A T A C G G A C T C T A G G T C A G A C T C G A T T C A G C G T A C G A T A T G C A G C T G A C T A T G C

PH0026.1_Duxbl/Jaspar

Match Rank:5
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TGTGGTTGATTGATTC-
NNNNGTTGATTGGGTCG
 A C G T A C T G A C G T A C T G A T C G G C A T A C G T A C T G C G T A A G C T A C G T A C T G C G T A A C G T A C G T A G T C A C G T
A T G C C G T A A G T C A G T C T C A G G A C T C G A T C T A G C T G A A C G T A C G T C T A G T C A G T C A G G A C T G A T C T C A G

Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:6
Score:0.64
Offset:6
Orientation:reverse strand
Alignment:TGTGGTTGATTGATTC
------TAATTGATTA
 A C G T A C T G A C G T A C T G A T C G G C A T A C G T A C T G C G T A A G C T A C G T A C T G C G T A A C G T A C G T A G T C
A C G T A C G T A C G T A C G T A C G T A C G T C G A T T C G A C G T A A G C T A C G T C T A G C T G A A C G T A G C T G C T A

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:7
Score:0.63
Offset:6
Orientation:reverse strand
Alignment:TGTGGTTGATTGATTC
------TGATTGATGA
 A C G T A C T G A C G T A C T G A T C G G C A T A C G T A C T G C G T A A G C T A C G T A C T G C G T A A C G T A C G T A G T C
A C G T A C G T A C G T A C G T A C G T A C G T C G A T T C A G G T C A A G C T C G A T C T A G C G T A A C G T C A T G C T G A

Dux/MA0611.1/Jaspar

Match Rank:8
Score:0.62
Offset:5
Orientation:reverse strand
Alignment:TGTGGTTGATTGATTC
-----TTGATTGN---
 A C G T A C T G A C G T A C T G A T C G G C A T A C G T A C T G C G T A A G C T A C G T A C T G C G T A A C G T A C G T A G T C
A C G T A C G T A C G T A C G T A C G T G A C T A C G T A C T G C G T A A C G T A C G T C T A G A T C G A C G T A C G T A C G T

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer

Match Rank:9
Score:0.62
Offset:5
Orientation:reverse strand
Alignment:TGTGGTTGATTGATTC-
-----ATGATKGATGRC
 A C G T A C T G A C G T A C T G A T C G G C A T A C G T A C T G C G T A A G C T A C G T A C T G C G T A A C G T A C G T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T C T G A C G A T A T C G C G T A C G A T C A G T C T A G C G T A C G A T A C T G C T G A A T G C

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:10
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TGTGGTTGATTGATTC
NNTGTGGTTT--------
 A C G T A C G T A C G T A C T G A C G T A C T G A T C G G C A T A C G T A C T G C G T A A G C T A C G T A C T G C G T A A C G T A C G T A G T C
A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T