Information for 12-KTAMACTCAGAMTGAM (Motif 28)

A C T G C G A T C G T A T G C A C G T A G T A C G C A T G T A C C G T A C T A G C T G A T G C A A C G T A C T G G T C A G T A C
Reverse Opposite:
A C T G A C G T A G T C G T C A A C G T A G C T A G T C A C G T A C T G C G T A A C T G C G A T A C G T A C G T C G T A G T A C
p-value:1e-9
log p-value:-2.078e+01
Information Content per bp:1.861
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.71%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets32.2 +/- 8.8bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer

Match Rank:1
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:KTAMACTCAGAMTGAM----
--WNAGTCADAVTGAAACTN
 A C T G C G A T C G T A T G C A C G T A G T A C G C A T G T A C C G T A C T A G C T G A T G C A A C G T A C T G G T C A G T A C A C G T A C G T A C G T A C G T
A C G T A C G T G C A T T A C G C G T A A T C G G C A T T A G C G C T A C G T A G C T A T G C A C G A T T C A G C T G A T C G A T C G A T A G C G A C T T C A G

IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:2
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:KTAMACTCAGAMTGAM--
---BAGTCATANTGAAAG
 A C T G C G A T C G T A T G C A C G T A G T A C G C A T G T A C C G T A C T A G C T G A T G C A A C G T A C T G G T C A G T A C A C G T A C G T
A C G T A C G T A C G T A C T G C G T A A T C G C G A T T G A C C G T A C G A T G C T A G T C A C G A T T C A G C T G A C T G A C T G A T A C G

PB0207.1_Zic3_2/Jaspar

Match Rank:3
Score:0.55
Offset:2
Orientation:forward strand
Alignment:KTAMACTCAGAMTGAM-
--GAGCACAGCAGGACA
 A C T G C G A T C G T A T G C A C G T A G T A C G C A T G T A C C G T A C T A G C T G A T G C A A C G T A C T G G T C A G T A C A C G T
A C G T A C G T C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:4
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:KTAMACTCAGAMTGAM--
BTGACCTCTNNHTGACCY
 A C T G C G A T C G T A T G C A C G T A G T A C G C A T G T A C C G T A C T A G C T G A T G C A A C G T A C T G G T C A G T A C A C G T A C G T
A T C G A C G T A T C G T G C A G T A C A G T C A G C T A T G C C G A T T A C G A T G C G T A C G A C T T A C G T G C A G T A C G A T C A G C T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:5
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:KTAMACTCAGAMTGAM
----DCTCAGCAGG--
 A C T G C G A T C G T A T G C A C G T A G T A C G C A T G T A C C G T A C T A G C T G A T G C A A C G T A C T G G T C A G T A C
A C G T A C G T A C G T A C G T C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:6
Score:0.53
Offset:2
Orientation:forward strand
Alignment:KTAMACTCAGAMTGAM-
--CCACACAGCAGGAGA
 A C T G C G A T C G T A T G C A C G T A G T A C G C A T G T A C C G T A C T A G C T G A T G C A A C G T A C T G G T C A G T A C A C G T
A C G T A C G T G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

PB0205.1_Zic1_2/Jaspar

Match Rank:7
Score:0.53
Offset:2
Orientation:forward strand
Alignment:KTAMACTCAGAMTGAM-
--CCACACAGCAGGAGA
 A C T G C G A T C G T A T G C A C G T A G T A C G C A T G T A C C G T A C T A G C T G A T G C A A C G T A C T G G T C A G T A C A C G T
A C G T A C G T A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

POL002.1_INR/Jaspar

Match Rank:8
Score:0.51
Offset:7
Orientation:reverse strand
Alignment:KTAMACTCAGAMTGAM
-------NNNANTGA-
 A C T G C G A T C G T A T G C A C G T A G T A C G C A T G T A C C G T A C T A G C T G A T G C A A C G T A C T G G T C A G T A C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A T C G A C T A G C T G A T A G C C G A T A C T G G T C A A C G T

FOXP1/MA0481.1/Jaspar

Match Rank:9
Score:0.50
Offset:-5
Orientation:forward strand
Alignment:-----KTAMACTCAGAMTGAM
CAAAAGTAAACAAAG------
 A C G T A C G T A C G T A C G T A C G T A C T G C G A T C G T A T G C A C G T A G T A C G C A T G T A C C G T A C T A G C T G A T G C A A C G T A C T G G T C A G T A C
G T A C G C T A C G T A T C G A C T G A T C A G G C A T C G T A C G T A C G T A T G A C C G T A T G C A C G T A T C A G A C G T A C G T A C G T A C G T A C G T A C G T

RARA::RXRA/MA0159.1/Jaspar

Match Rank:10
Score:0.50
Offset:1
Orientation:reverse strand
Alignment:KTAMACTCAGAMTGAM--
-TGACCTCTCNNTGACCT
 A C T G C G A T C G T A T G C A C G T A G T A C G C A T G T A C C G T A C T A G C T G A T G C A A C G T A C T G G T C A G T A C A C G T A C G T
A C G T G A C T T A C G G T C A T G A C A G T C A C G T A T G C G A C T A G T C A T G C T C A G A G C T T A C G G T C A G T A C A G T C A G C T