Information for 9-CTGGCTCTAG (Motif 20)

A T G C A C G T A C T G A C T G A G T C A C G T A T G C G C A T G T C A C T A G
Reverse Opposite:
A G T C C A G T C G T A A T C G C G T A C T A G G T A C A G T C C G T A A T C G
p-value:1e-9
log p-value:-2.080e+01
Information Content per bp:1.848
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif2.47%
Number of Background Sequences with motif124.1
Percentage of Background Sequences with motif0.27%
Average Position of motif in Targets40.5 +/- 26.4bp
Average Position of motif in Background56.2 +/- 29.0bp
Strand Bias (log2 ratio + to - strand density)-1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-CTGGCTCTAG----
BCNGGTTCTAGANCN
 A C G T A T G C A C G T A C T G A C T G A G T C A C G T A T G C G C A T G T C A C T A G A C G T A C G T A C G T A C G T
A G C T T G A C C T A G C A T G C T A G G A C T A C G T A G T C A G C T C T G A T A C G T C G A C G A T A G T C G A C T

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:CTGGCTCTAG----
--GGCTCYAKCAYC
 A T G C A C G T A C T G A C T G A G T C A C G T A T G C G C A T G T C A C T A G A C G T A C G T A C G T A C G T
A C G T A C G T C A T G A C T G A G T C A C G T A G T C G A T C C G T A A C T G T A G C C T G A A G C T T A G C

NFIX/MA0671.1/Jaspar

Match Rank:3
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CTGGCTCTAG
NTTGGCANN--
 A C G T A T G C A C G T A C T G A C T G A G T C A C G T A T G C G C A T G T C A C T A G
A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:4
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CTGGCTCTAG
TTGGCA----
 A T G C A C G T A C T G A C T G A G T C A C G T A T G C G C A T G T C A C T A G
G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:5
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:CTGGCTCTAG
--NGCTN---
 A T G C A C G T A C T G A C T G A G T C A C G T A T G C G C A T G T C A C T A G
A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:6
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---CTGGCTCTAG
GGTCTGGCAT---
 A C G T A C G T A C G T A T G C A C G T A C T G A C T G A G T C A C G T A T G C G C A T G T C A C T A G
A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T A C G T A C G T A C G T

PB0090.1_Zbtb12_1/Jaspar

Match Rank:7
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CTGGCTCTAG-----
CTAAGGTTCTAGATCAC
 A C G T A C G T A T G C A C G T A C T G A C T G A G T C A C G T A T G C G C A T G T C A C T A G A C G T A C G T A C G T A C G T A C G T
A T G C A C G T G C T A T C G A A C T G C T A G C G A T C G A T A G T C A G C T T C G A C T A G T C G A G C A T A G T C T G C A A G T C

RHOXF1/MA0719.1/Jaspar

Match Rank:8
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:CTGGCTCTAG
-NGGATTAN-
 A T G C A C G T A C T G A C T G A G T C A C G T A T G C G C A T G T C A C T A G
A C G T C A T G C T A G A C T G G T C A A C G T G A C T G C T A C G A T A C G T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---CTGGCTCTAG
GCTCGGSCTC---
 A C G T A C G T A C G T A T G C A C G T A C T G A C T G A G T C A C G T A T G C G C A T G T C A C T A G
C T A G G T A C A C G T A T G C C T A G A C T G T A C G A G T C A C G T A G T C A C G T A C G T A C G T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:10
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--CTGGCTCTAG
TGCTGACTCA--
 A C G T A C G T A T G C A C G T A C T G A C T G A G T C A C G T A T G C G C A T G T C A C T A G
G A C T C T A G G A T C C A G T A C T G C T G A A T G C G C A T A T G C C T G A A C G T A C G T