Information for 4-AATASTCAACTGAAAA (Motif 13)

C G T A C G T A A C G T C T G A A T C G A G C T A T G C G T C A C G T A A T G C A C G T C T A G C G T A C T G A C G T A C G T A
Reverse Opposite:
G A C T G A C T A G C T C G A T A G T C T C G A T A C G C G A T C A G T T A C G C T G A T A G C A G C T G T C A C G A T A C G T
p-value:1e-10
log p-value:-2.446e+01
Information Content per bp:1.697
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.59%
Number of Background Sequences with motif23.3
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets37.2 +/- 21.9bp
Average Position of motif in Background47.3 +/- 24.3bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr2e1/MA0676.1/Jaspar

Match Rank:1
Score:0.54
Offset:0
Orientation:forward strand
Alignment:AATASTCAACTGAAAA
AAAAGTCAA-------
 C G T A C G T A A C G T C T G A A T C G A G C T A T G C G T C A C G T A A T G C A C G T C T A G C G T A C T G A C G T A C G T A
G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0005.1_Bbx_1/Jaspar

Match Rank:2
Score:0.51
Offset:2
Orientation:forward strand
Alignment:AATASTCAACTGAAAA-
--TAATTCAATGAAGTG
 C G T A C G T A A C G T C T G A A T C G A G C T A T G C G T C A C G T A A T G C A C G T C T A G C G T A C T G A C G T A C G T A A C G T
A C G T A C G T G C A T G C T A C T G A C G A T C G A T T G A C G C T A C G T A C G A T A C T G C G T A G C T A A T C G G C A T C T A G

PB0134.1_Hnf4a_2/Jaspar

Match Rank:3
Score:0.50
Offset:-3
Orientation:forward strand
Alignment:---AATASTCAACTGAAAA
GGCAAAAGTCCAATAA---
 A C G T A C G T A C G T C G T A C G T A A C G T C T G A A T C G A G C T A T G C G T C A C G T A A T G C A C G T C T A G C G T A C T G A C G T A C G T A
A C G T A C G T G A T C G T A C C G T A C T G A C T G A A C T G A C G T G T A C A G T C C T G A G T C A C G A T G T C A G C A T A C G T A C G T A C G T

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:4
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-AATASTCAACTGAAAA
GAATATTCAT-------
 A C G T C G T A C G T A A C G T C T G A A T C G A G C T A T G C G T C A C G T A A T G C A C G T C T A G C G T A C T G A C G T A C G T A
T C A G G T C A C G T A A G C T C G T A G A C T C A G T A T G C T C G A C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0068.1_Sox1_1/Jaspar

Match Rank:5
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-AATASTCAACTGAAAA
NNNTATTGAATTGNNN-
 A C G T C G T A C G T A A C G T C T G A A T C G A G C T A T G C G T C A C G T A A T G C A C G T C T A G C G T A C T G A C G T A C G T A
T G C A G C T A C A G T G C A T C G T A C G A T C G A T A T C G G C T A C G T A C G A T C G A T C T A G G T C A G C A T C G A T A C G T

NFE2/MA0841.1/Jaspar

Match Rank:6
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-AATASTCAACTGAAAA
CATGACTCATC------
 A C G T C G T A C G T A A C G T C T G A A T C G A G C T A T G C G T C A C G T A A T G C A C G T C T A G C G T A C T G A C G T A C G T A
T G A C T C G A G A C T A C T G G T C A T A G C A G C T G A T C T G C A A G C T A T G C A C G T A C G T A C G T A C G T A C G T A C G T

BATF::JUN/MA0462.1/Jaspar

Match Rank:7
Score:0.49
Offset:-3
Orientation:forward strand
Alignment:---AATASTCAACTGAAAA
GAAATGACTCA--------
 A C G T A C G T A C G T C G T A C G T A A C G T C T G A A T C G A G C T A T G C G T C A C G T A A T G C A C G T C T A G C G T A C T G A C G T A C G T A
C T A G C T G A C G T A G T C A A C G T A C T G C G T A T A G C A C G T T G A C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MF0009.1_TRP(MYB)_class/Jaspar

Match Rank:8
Score:0.49
Offset:7
Orientation:reverse strand
Alignment:AATASTCAACTGAAAA
-------AACCGANA-
 C G T A C G T A A C G T C T G A A T C G A G C T A T G C G T C A C G T A A T G C A C G T C T A G C G T A C T G A C G T A C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A T A G C A G T C C T A G G C T A G T A C G C T A A C G T

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.48
Offset:8
Orientation:forward strand
Alignment:AATASTCAACTGAAAA--
--------ACTGAAACCA
 C G T A C G T A A C G T C T G A A T C G A G C T A T G C G T C A C G T A A T G C A C G T C T A G C G T A C T G A C G T A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A T A G C A G C T A T C G G T C A C G T A G C T A A T G C G A T C C T G A

JDP2/MA0655.1/Jaspar

Match Rank:10
Score:0.48
Offset:0
Orientation:forward strand
Alignment:AATASTCAACTGAAAA
ATGACTCAT-------
 C G T A C G T A A C G T C T G A A T C G A G C T A T G C G T C A C G T A A T G C A C G T C T A G C G T A C T G A C G T A C G T A
T C G A G A C T A C T G C G T A T A G C C A G T G T A C C G T A G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T