Information for 8-TCTAGTGRTYAAR (Motif 10)

A G C T T G A C G C A T C G T A A T C G A C G T A C T G T C G A C G A T G A C T G C T A G T C A C T A G
Reverse Opposite:
G A T C A C G T C A G T C T G A G C T A A G C T A G T C C G T A T A G C A C G T C G T A A C T G C T G A
p-value:1e-11
log p-value:-2.561e+01
Information Content per bp:1.678
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif2.83%
Number of Background Sequences with motif123.1
Percentage of Background Sequences with motif0.27%
Average Position of motif in Targets38.9 +/- 25.1bp
Average Position of motif in Background45.8 +/- 30.1bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0111.1_Nkx2-2/Jaspar

Match Rank:1
Score:0.68
Offset:-5
Orientation:reverse strand
Alignment:-----TCTAGTGRTYAAR
NANTTTCAAGTGGTTAN-
 A C G T A C G T A C G T A C G T A C G T A G C T T G A C G C A T C G T A A T C G A C G T A C T G T C G A C G A T G A C T G C T A G T C A C T A G
G C T A T G C A G C A T G C A T A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G A T A C G T

NKX2-3/MA0672.1/Jaspar

Match Rank:2
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-TCTAGTGRTYAAR
NTCAAGTGGN----
 A C G T A G C T T G A C G C A T C G T A A T C G A C G T A C T G T C G A C G A T G A C T G C T A G T C A C T A G
A G C T G C A T A G T C C T G A G T C A A C T G C G A T C T A G A T C G A C G T A C G T A C G T A C G T A C G T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:3
Score:0.66
Offset:0
Orientation:forward strand
Alignment:TCTAGTGRTYAAR
TTRAGTGSYK---
 A G C T T G A C G C A T C G T A A T C G A C G T A C T G T C G A C G A T G A C T G C T A G T C A C T A G
A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T A C G T A C G T A C G T

NKX2-8/MA0673.1/Jaspar

Match Rank:4
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TCTAGTGRTYAAR
NTCAAGTGG-----
 A C G T A G C T T G A C G C A T C G T A A T C G A C G T A C T G T C G A C G A T G A C T G C T A G T C A C T A G
A G C T C G A T A T G C C T G A C T G A C T A G C A G T C T A G A T C G A C G T A C G T A C G T A C G T A C G T

PH0113.1_Nkx2-4/Jaspar

Match Rank:5
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----TCTAGTGRTYAAR
AATTTCAAGTGGCTTN-
 A C G T A C G T A C G T A C G T A G C T T G A C G C A T C G T A A T C G A C G T A C T G T C G A C G A T G A C T G C T A G T C A C T A G
C T G A C G T A C G A T A C G T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G A G T C G C A T G A C T C G T A A C G T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:6
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TCTAGTGRTYAAR
BTBRAGTGSN----
 A C G T A G C T T G A C G C A T C G T A A T C G A C G T A C T G T C G A C G A T G A C T G C T A G T C A C T A G
A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C A C G T A C G T A C G T A C G T

PH0004.1_Nkx3-2/Jaspar

Match Rank:7
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----TCTAGTGRTYAAR
NTNNTTAAGTGGTTANN
 A C G T A C G T A C G T A C G T A G C T T G A C G C A T C G T A A T C G A C G T A C T G T C G A C G A T G A C T G C T A G T C A C T A G
C T A G C A G T A C G T A T C G G C A T C G A T C T G A C T G A A C T G C G A T C T A G A T C G C G A T A G C T C G T A C G A T A C T G

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:8
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----TCTAGTGRTYAAR
NTNNTTAAGTGGNTNAN
 A C G T A C G T A C G T A C G T A G C T T G A C G C A T C G T A A T C G A C G T A C T G T C G A C G A T G A C T G C T A G T C A C T A G
T C G A A G C T A G T C A T G C G C A T C G A T C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G T A C A T G

PH0171.1_Nkx2-1/Jaspar

Match Rank:9
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----TCTAGTGRTYAAR
AANTTCAAGTGGCTTN-
 A C G T A C G T A C G T A C G T A G C T T G A C G C A T C G T A A T C G A C G T A C T G T C G A C G A T G A C T G C T A G T C A C T A G
C G T A C G T A C A G T A C G T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G T A G C G A C T A C G T T C G A A C G T

PH0114.1_Nkx2-5/Jaspar

Match Rank:10
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----TCTAGTGRTYAAR
AAATTCAAGTGGNTTN-
 A C G T A C G T A C G T A C G T A G C T T G A C G C A T C G T A A T C G A C G T A C T G T C G A C G A T G A C T G C T A G T C A C T A G
C T G A C T G A C G T A A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G T A C G A C T G A C T C G T A A C G T