Information for 8-CTACTCAGAC (Motif 19)

A G T C A C G T C G T A A G T C A C G T A G T C C G T A A C T G C G T A A G T C
Reverse Opposite:
A C T G A C G T A G T C A C G T A C T G C G T A A C T G A C G T C G T A A C T G
p-value:1e-3
log p-value:-8.060e+00
Information Content per bp:1.530
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.97%
Number of Background Sequences with motif6.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets37.7 +/- 18.3bp
Average Position of motif in Background78.2 +/- 19.4bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:1
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:CTACTCAGAC--
----BCAGACWA
 A G T C A C G T C G T A A G T C A C G T A G T C C G T A A C T G C G T A A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:CTACTCAGAC--
----CCAGACAG
 A G T C A C G T C G T A A G T C A C G T A G T C C G T A A C T G C G T A A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:CTACTCAGAC----
----CCAGACRSVB
 A G T C A C G T C G T A A G T C A C G T A G T C C G T A A C T G C G T A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

PB0060.1_Smad3_1/Jaspar

Match Rank:4
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CTACTCAGAC------
CAAATCCAGACATCACA
 A C G T A G T C A C G T C G T A A G T C A C G T A G T C C G T A A C T G C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

PB0114.1_Egr1_2/Jaspar

Match Rank:5
Score:0.56
Offset:-6
Orientation:reverse strand
Alignment:------CTACTCAGAC
NNAGTCCCACTCNNNN
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T C G T A A G T C A C G T A G T C C G T A A C T G C G T A A G T C
T G A C G A T C C G T A C T A G G C A T G T A C G A T C G A T C G T C A A G T C A G C T G A T C T A G C C T A G T G A C T G C A

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:6
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--CTACTCAGAC
MRSCACTYAA--
 A C G T A C G T A G T C A C G T C G T A A G T C A C G T A G T C C G T A A C T G C G T A A G T C
G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A A C G T A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:7
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--CTACTCAGAC
AGCCACTCAAG-
 A C G T A C G T A G T C A C G T C G T A A G T C A C G T A G T C C G T A A C T G C G T A A G T C
C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G A C G T

PB0155.1_Osr2_2/Jaspar

Match Rank:8
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----CTACTCAGAC-
ACTTGCTACCTACACC
 A C G T A C G T A C G T A C G T A C G T A G T C A C G T C G T A A G T C A C G T A G T C C G T A A C T G C G T A A G T C A C G T
C T G A G A T C G A C T G A C T T A C G A G T C G A C T G C T A G T A C G A T C G C A T T C G A G T A C C G T A A G C T T G A C

POL002.1_INR/Jaspar

Match Rank:9
Score:0.54
Offset:4
Orientation:forward strand
Alignment:CTACTCAGAC--
----TCAGTCTT
 A G T C A C G T C G T A A G T C A C G T A G T C C G T A A C T G C G T A A G T C A C G T A C G T
A C G T A C G T A C G T A C G T C A G T A G T C C G T A A T C G G A C T G A T C A G C T A G C T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:CTACTCAGAC-
-TGCCCAGNHW
 A G T C A C G T C G T A A G T C A C G T A G T C C G T A A C T G C G T A A G T C A C G T
A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A