Information for 6-CCCCTGGGGATCCCCC (Motif 13)

A T G C A G T C A G T C A G T C A G C T A C T G A C T G A C T G A C T G C G T A A G C T A G T C A G T C A G T C G T A C G T A C
Reverse Opposite:
A C T G A C T G A C T G A C T G C T A G C T G A A C G T A G T C A G T C A G T C A G T C C T G A A C T G A C T G A C T G A T C G
p-value:1e-7
log p-value:-1.820e+01
Information Content per bp:1.884
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif1.45%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets55.8 +/- 18.9bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:1
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-CCCCTGGGGATCCCCC
TCCCCTGGGGAC-----
 A C G T A T G C A G T C A G T C A G T C A G C T A C T G A C T G A C T G A C T G C G T A A G C T A G T C A G T C A G T C G T A C G T A C
A G C T A G T C A G T C G A T C G A T C C G A T C T A G C T A G C T A G T C A G T G C A G T A C A C G T A C G T A C G T A C G T A C G T

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:2
Score:0.75
Offset:5
Orientation:reverse strand
Alignment:CCCCTGGGGATCCCCC-
-----GGGGATTCCCCC
 A T G C A G T C A G T C A G T C A G C T A C T G A C T G A C T G A C T G C G T A A G C T A G T C A G T C A G T C G T A C G T A C A C G T
A C G T A C G T A C G T A C G T A C G T A C T G C T A G C A T G T C A G G C T A G A C T A G C T A G T C A G T C G A T C G A T C A G T C

NFKB2/MA0778.1/Jaspar

Match Rank:3
Score:0.72
Offset:4
Orientation:forward strand
Alignment:CCCCTGGGGATCCCCC-
----AGGGGATTCCCCT
 A T G C A G T C A G T C A G T C A G C T A C T G A C T G A C T G A C T G C G T A A G C T A G T C A G T C A G T C G T A C G T A C A C G T
A C G T A C G T A C G T A C G T T G C A T C A G A C T G C A T G C T A G T G C A G C A T G A C T G A T C G T A C G A T C G A T C A G C T

NFKB1/MA0105.4/Jaspar

Match Rank:4
Score:0.70
Offset:4
Orientation:reverse strand
Alignment:CCCCTGGGGATCCCCC-
----AGGGGATTCCCCT
 A T G C A G T C A G T C A G T C A G C T A C T G A C T G A C T G A C T G C G T A A G C T A G T C A G T C A G T C G T A C G T A C A C G T
A C G T A C G T A C G T A C G T T G C A C T A G C A T G C A T G C T A G T C G A G C A T A G C T G A T C G T A C T A G C G A T C A C G T

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:5
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--CCCCTGGGGATCCCCC
NGTCCCNNGGGA------
 A C G T A C G T A T G C A G T C A G T C A G T C A G C T A C T G A C T G A C T G A C T G C G T A A G C T A G T C A G T C A G T C G T A C G T A C
C T A G A T C G G A C T A G T C A G T C A G T C G A C T C T G A A C T G C T A G A C T G C T G A A C G T A C G T A C G T A C G T A C G T A C G T

MZF1/MA0056.1/Jaspar

Match Rank:6
Score:0.63
Offset:4
Orientation:forward strand
Alignment:CCCCTGGGGATCCCCC
----TGGGGA------
 A T G C A G T C A G T C A G T C A G C T A C T G A C T G A C T G A C T G C G T A A G C T A G T C A G T C A G T C G T A C G T A C
A C G T A C G T A C G T A C G T A G C T A C T G C T A G A C T G A C T G C T G A A C G T A C G T A C G T A C G T A C G T A C G T

EBF1/MA0154.3/Jaspar

Match Rank:7
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--CCCCTGGGGATCCCCC
ANTCCCTNGGGAAT----
 A C G T A C G T A T G C A G T C A G T C A G T C A G C T A C T G A C T G A C T G A C T G C G T A A G C T A G T C A G T C A G T C G T A C G T A C
C T G A C A G T G A C T G T A C A G T C A G T C G C A T C G A T C T A G T C A G T A C G C T G A T G C A G A C T A C G T A C G T A C G T A C G T

PB0102.1_Zic2_1/Jaspar

Match Rank:8
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---CCCCTGGGGATCCCCC
ACCCCCCCGGGGGGN----
 A C G T A C G T A C G T A T G C A G T C A G T C A G T C A G C T A C T G A C T G A C T G A C T G C G T A A G C T A G T C A G T C A G T C G T A C G T A C
T G C A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G A T C G A C T G C A T G C A T G C A T G T A C G A C G T A C G T A C G T A C G T

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:9
Score:0.62
Offset:5
Orientation:reverse strand
Alignment:CCCCTGGGGATCCCCC-
-----GGGAAATCCCCN
 A T G C A G T C A G T C A G T C A G C T A C T G A C T G A C T G A C T G C G T A A G C T A G T C A G T C A G T C G T A C G T A C A C G T
A C G T A C G T A C G T A C G T A C G T C A T G C T A G C T A G C T G A G C T A C G T A A G C T G A T C G T A C G T A C G T A C G C A T

PB0103.1_Zic3_1/Jaspar

Match Rank:10
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---CCCCTGGGGATCCCCC
NCCCCCCCGGGGGGN----
 A C G T A C G T A C G T A T G C A G T C A G T C A G T C A G C T A C T G A C T G A C T G A C T G C G T A A G C T A G T C A G T C A G T C G T A C G T A C
T C G A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G T A C G A C T G C A T G C A T G C A T G T A C G A C G T A C G T A C G T A C G T