p-value: | 1e-10 |
log p-value: | -2.319e+01 |
Information Content per bp: | 1.849 |
Number of Target Sequences with motif | 13.0 |
Percentage of Target Sequences with motif | 1.72% |
Number of Background Sequences with motif | 63.4 |
Percentage of Background Sequences with motif | 0.14% |
Average Position of motif in Targets | 39.7 +/- 24.5bp |
Average Position of motif in Background | 51.3 +/- 31.5bp |
Strand Bias (log2 ratio + to - strand density) | 1.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
PB0168.1_Sox14_2/Jaspar
Match Rank: | 1 |
Score: | 0.74 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----CACAATAGGC- CTCACACAATGGCGC |
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PB0183.1_Sry_2/Jaspar
Match Rank: | 2 |
Score: | 0.73 |
Offset: | -6 |
Orientation: | forward strand |
Alignment: | ------CACAATAGGC- TCACGGAACAATAGGTG |
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PB0132.1_Hbp1_2/Jaspar
Match Rank: | 3 |
Score: | 0.72 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----CACAATAGGC--- NNTNNACAATGGGANNN |
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Sox17/MA0078.1/Jaspar
Match Rank: | 4 |
Score: | 0.72 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | CACAATAGGC GACAATGNN- |
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SOX9/MA0077.1/Jaspar
Match Rank: | 5 |
Score: | 0.69 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -CACAATAGGC GAACAATGG-- |
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PB0173.1_Sox21_2/Jaspar
Match Rank: | 6 |
Score: | 0.69 |
Offset: | -6 |
Orientation: | reverse strand |
Alignment: | ------CACAATAGGC- NNNNNGAACAATTGANN |
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Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer
Match Rank: | 7 |
Score: | 0.67 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --CACAATAGGC RNAACAATGG-- |
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Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer
Match Rank: | 8 |
Score: | 0.66 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --CACAATAGGC VRAACAATGG-- |
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Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer
Match Rank: | 9 |
Score: | 0.66 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | CACAATAGGC RACAAWGG-- |
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PB0065.1_Sox15_1/Jaspar
Match Rank: | 10 |
Score: | 0.66 |
Offset: | -5 |
Orientation: | forward strand |
Alignment: | -----CACAATAGGC-- TAGTGAACAATAGATTT |
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