Information for 4-CTGCTGGDAAGAAATH (Motif 10)

A T G C A C G T A C T G A G T C C G A T A T C G A C T G C G A T G T C A G T C A C T A G C T G A C G T A C G T A A C G T G C T A
Reverse Opposite:
C A G T G T C A A C G T A C G T G A C T A G T C A C G T A C G T G C A T T G A C A T G C C G T A A C T G A G T C C G T A A T C G
p-value:1e-9
log p-value:-2.301e+01
Information Content per bp:1.745
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.79%
Number of Background Sequences with motif4.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets68.2 +/- 25.9bp
Average Position of motif in Background47.3 +/- 14.6bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BCL6B/MA0731.1/Jaspar

Match Rank:1
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CTGCTGGDAAGAAATH--
-TGCTTTCTAGGAATTCA
 A T G C A C G T A C T G A G T C C G A T A T C G A C T G C G A T G T C A G T C A C T A G C T G A C G T A C G T A A C G T G C T A A C G T A C G T
A C G T A G C T C T A G A G T C A C G T A C G T A C G T A G T C A C G T C G T A A C T G A C T G C T G A C G T A A G C T A G C T T G A C T G C A

PB0205.1_Zic1_2/Jaspar

Match Rank:2
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----CTGCTGGDAAGAAATH
TNTCCTGCTGTGNNG-----
 A C G T A C G T A C G T A C G T A T G C A C G T A C T G A G T C C G A T A T C G A C T G C G A T G T C A G T C A C T A G C T G A C G T A C G T A A C G T G C T A
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G A C G T A C G T A C G T A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:3
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----CTGCTGGDAAGAAATH
CCCCCTGCTGTG--------
 A C G T A C G T A C G T A C G T A T G C A C G T A C T G A G T C C G A T A T C G A C T G C G A T G T C A G T C A C T A G C T G A C G T A C G T A A C G T G C T A
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Rhox11/MA0629.1/Jaspar

Match Rank:4
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---CTGCTGGDAAGAAATH
AAGACGCTGTAAAGCGA--
 A C G T A C G T A C G T A T G C A C G T A C T G A G T C C G A T A T C G A C T G C G A T G T C A G T C A C T A G C T G A C G T A C G T A A C G T G C T A
C G T A T G C A C A T G T G C A G A T C C T A G T A G C C A G T C T A G G A C T C G T A G C T A G C T A C T A G T A G C T C A G G C T A A C G T A C G T

PH0157.1_Rhox11_1/Jaspar

Match Rank:5
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---CTGCTGGDAAGAAATH
AAGACGCTGTAAAGCGA--
 A C G T A C G T A C G T A T G C A C G T A C T G A G T C C G A T A T C G A C T G C G A T G T C A G T C A C T A G C T G A C G T A C G T A A C G T G C T A
C G T A T G C A C A T G T G C A G A T C C T A G T A G C C A G T C T A G G A C T C G T A G C T A G C T A C T A G T A G C T C A G G C T A A C G T A C G T

STAT3/MA0144.2/Jaspar

Match Rank:6
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CTGCTGGDAAGAAATH
CTTCTGGGAAA-----
 A T G C A C G T A C T G A G T C C G A T A T C G A C T G C G A T G T C A G T C A C T A G C T G A C G T A C G T A A C G T G C T A
A G T C C G A T A C G T G A T C G A C T C A T G C T A G C T A G C G T A C G T A C T G A A C G T A C G T A C G T A C G T A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:7
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----CTGCTGGDAAGAAATH
TCNCCTGCTGNGNNN-----
 A C G T A C G T A C G T A C G T A T G C A C G T A C T G A G T C C G A T A T C G A C T G C G A T G T C A G T C A C T A G C T G A C G T A C G T A A C G T G C T A
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G A C G T A C G T A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:8
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CTGCTGGDAAGAAATH
-NGCTN----------
 A T G C A C G T A C T G A G T C C G A T A T C G A C T G C G A T G T C A G T C A C T A G C T G A C G T A C G T A A C G T G C T A
A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0158.1_Rhox11_2/Jaspar

Match Rank:9
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---CTGCTGGDAAGAAATH
AGGACGCTGTAAAGGGA--
 A C G T A C G T A C G T A T G C A C G T A C T G A G T C C G A T A T C G A C T G C G A T G T C A G T C A C T A G C T G A C G T A C G T A A C G T G C T A
C G T A T C A G C A T G G T C A G A T C C T A G T A G C C A G T C T A G G A C T G C T A C G T A G C T A C T A G T A C G T C A G G C T A A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:10
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-CTGCTGGDAAGAAATH
CCTGCTGAGH-------
 A C G T A T G C A C G T A C T G A G T C C G A T A T C G A C T G C G A T G T C A G T C A C T A G C T G A C G T A C G T A A C G T G C T A
A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T