Information for 2-AAACCTGCCTTTVTTT (Motif 6)

G C T A C T G A C G T A A G T C G T A C A G C T A C T G A T G C A G T C A G C T A G C T A C G T T C G A A C G T G A C T A C G T
Reverse Opposite:
C G T A C T G A C G T A A G C T C G T A C T G A T C G A A C T G A T C G T G A C C T G A A C T G A C T G A C G T A G C T C G A T
p-value:1e-15
log p-value:-3.456e+01
Information Content per bp:1.772
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.05%
Number of Background Sequences with motif5.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets32.6 +/- 17.8bp
Average Position of motif in Background46.8 +/- 22.7bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox3/MA0514.1/Jaspar

Match Rank:1
Score:0.63
Offset:7
Orientation:forward strand
Alignment:AAACCTGCCTTTVTTT-
-------CCTTTGTTTT
 G C T A C T G A C G T A A G T C G T A C A G C T A C T G A T G C A G T C A G C T A G C T A C G T T C G A A C G T G A C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T

PB0166.1_Sox12_2/Jaspar

Match Rank:2
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:AAACCTGCCTTTVTTT----
----ANTCCTTTGTCTNNNN
 G C T A C T G A C G T A A G T C G T A C A G C T A C T G A T G C A G T C A G C T A G C T A C G T T C G A A C G T G A C T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A G C A T A C G T A G T C A T G C C G A T A G C T C G A T T C A G A C G T T A G C G A C T T C A G G C A T A C G T A C G T

Sox2/MA0143.3/Jaspar

Match Rank:3
Score:0.58
Offset:7
Orientation:forward strand
Alignment:AAACCTGCCTTTVTTT
-------CCTTTGTT-
 G C T A C T G A C G T A A G T C G T A C A G C T A C T G A T G C A G T C A G C T A G C T A C G T T C G A A C G T G A C T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A C G T

Sox6/MA0515.1/Jaspar

Match Rank:4
Score:0.58
Offset:7
Orientation:forward strand
Alignment:AAACCTGCCTTTVTTT-
-------CCATTGTTTT
 G C T A C T G A C G T A A G T C G T A C A G C T A C T G A T G C A G T C A G C T A G C T A C G T T C G A A C G T G A C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G C T G A C T A G C T

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:5
Score:0.57
Offset:6
Orientation:reverse strand
Alignment:AAACCTGCCTTTVTTT
------NCCATTGTTY
 G C T A C T G A C G T A A G T C G T A C A G C T A C T G A T G C A G T C A G C T A G C T A C G T T C G A A C G T G A C T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G A G T C G A T C G C T A C G A T A C G T A T C G A C G T A G C T G A C T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:6
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:AAACCTGCCTTTVTTT
NNACTTGCCTT-----
 G C T A C T G A C G T A A G T C G T A C A G C T A C T G A T G C A G T C A G C T A G C T A C G T T C G A A C G T G A C T A C G T
T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T A C G T A C G T A C G T A C G T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:7
Score:0.56
Offset:7
Orientation:forward strand
Alignment:AAACCTGCCTTTVTTT-
-------CCWTTGTYYB
 G C T A C T G A C G T A A G T C G T A C A G C T A C T G A T G C A G T C A G C T A G C T A C G T T C G A A C G T G A C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:8
Score:0.56
Offset:7
Orientation:forward strand
Alignment:AAACCTGCCTTTVTTT-
-------YCTTTGTTCC
 G C T A C T G A C G T A A G T C G T A C A G C T A C T G A T G C A G T C A G C T A G C T A C G T T C G A A C G T G A C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:9
Score:0.56
Offset:7
Orientation:forward strand
Alignment:AAACCTGCCTTTVTTT
-------CCWTTGTY-
 G C T A C T G A C G T A A G T C G T A C A G C T A C T G A T G C A G T C A G C T A G C T A C G T T C G A A C G T G A C T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T A C G T

SOX10/MA0442.1/Jaspar

Match Rank:10
Score:0.55
Offset:8
Orientation:forward strand
Alignment:AAACCTGCCTTTVTTT
--------CTTTGT--
 G C T A C T G A C G T A A G T C G T A C A G C T A C T G A T G C A G T C A G C T A G C T A C G T T C G A A C G T G A C T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G A T A C G T A C G T A T C G A C G T A C G T A C G T