Information for 4-TGTGTAAACA (Motif 4)

C G A T T C A G C G A T T C A G A G C T C G T A G C T A G T C A T A G C C T G A
Reverse Opposite:
G A C T A T C G C A G T C A G T G C A T T C G A A G T C G C T A A G T C G C T A
p-value:1e-18
log p-value:-4.370e+01
Information Content per bp:1.662
Number of Target Sequences with motif73.0
Percentage of Target Sequences with motif8.52%
Number of Background Sequences with motif1154.1
Percentage of Background Sequences with motif2.43%
Average Position of motif in Targets49.7 +/- 24.3bp
Average Position of motif in Background49.6 +/- 30.6bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:1
Score:0.89
Offset:0
Orientation:reverse strand
Alignment:TGTGTAAACA--
TATGTAAACANG
 C G A T T C A G C G A T T C A G A G C T C G T A G C T A G T C A T A G C C T G A A C G T A C G T
G C A T T C G A C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A C T G A T A C G

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:2
Score:0.88
Offset:-5
Orientation:forward strand
Alignment:-----TGTGTAAACA--
NNNVCTGWGYAAACASN
 A C G T A C G T A C G T A C G T A C G T C G A T T C A G C G A T T C A G A G C T C G T A G C T A G T C A T A G C C T G A A C G T A C G T
A T G C C T G A A T C G T A C G A G T C C G A T T C A G C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A T A C G C T G A

Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer

Match Rank:3
Score:0.87
Offset:-2
Orientation:reverse strand
Alignment:--TGTGTAAACA---
NCWRWGTAAACANSV
 A C G T A C G T C G A T T C A G C G A T T C A G A G C T C G T A G C T A G T C A T A G C C T G A A C G T A C G T A C G T
T G A C G A T C G C A T C T G A C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A C G T A A T C G T C A G

FOXA1/MA0148.3/Jaspar

Match Rank:4
Score:0.87
Offset:-1
Orientation:reverse strand
Alignment:-TGTGTAAACA----
CAAAGTAAACANNNN
 A C G T C G A T T C A G C G A T T C A G A G C T C G T A G C T A G T C A T A G C C T G A A C G T A C G T A C G T A C G T
G T A C G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C G C T A C G A T T A C G T C A G C T G A

Foxa2/MA0047.2/Jaspar

Match Rank:5
Score:0.87
Offset:-2
Orientation:reverse strand
Alignment:--TGTGTAAACA
NCTAAGTAAACA
 A C G T A C G T C G A T T C A G C G A T T C A G A G C T C G T A G C T A G T C A T A G C C T G A
T A G C G T A C G C A T T C G A C G T A C T A G A G C T G T C A T G C A C G T A A G T C C G T A

Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer

Match Rank:6
Score:0.86
Offset:2
Orientation:forward strand
Alignment:TGTGTAAACA
--DGTAAACA
 C G A T T C A G C G A T T C A G A G C T C G T A G C T A G T C A T A G C C T G A
A C G T A C G T C G A T C T A G A C G T G T C A C G T A C G T A A G T C C G T A

Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer

Match Rank:7
Score:0.86
Offset:-1
Orientation:forward strand
Alignment:-TGTGTAAACA-
WWATRTAAACAN
 A C G T C G A T T C A G C G A T T C A G A G C T C G T A G C T A G T C A T A G C C T G A A C G T
G C A T G C A T C T G A A C G T C T G A A C G T C G T A C G T A C G T A A G T C G T C A G T C A

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:8
Score:0.86
Offset:0
Orientation:forward strand
Alignment:TGTGTAAACA
AAAGTAAACA
 C G A T T C A G C G A T T C A G A G C T C G T A G C T A G T C A T A G C C T G A
G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A

FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer

Match Rank:9
Score:0.86
Offset:0
Orientation:forward strand
Alignment:TGTGTAAACA--
WWTRTAAACAVG
 C G A T T C A G C G A T T C A G A G C T C G T A G C T A G T C A T A G C C T G A A C G T A C G T
C G T A G C T A C G A T C T A G A C G T G T C A C G T A C G T A A G T C C G T A T G C A T A C G

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:10
Score:0.85
Offset:0
Orientation:forward strand
Alignment:TGTGTAAACA
AAAGTAAACA
 C G A T T C A G C G A T T C A G A G C T C G T A G C T A G T C A T A G C C T G A
G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A