Information for 14-KGTYCATTGKCTR (Motif 20)

A C G T A C T G A G C T A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G T C A G C T C T G A
Reverse Opposite:
A G C T C T G A A C T G G T C A A G T C C G T A C G T A A C G T A C T G C T A G C T G A G T A C G T C A
p-value:1e-8
log p-value:-1.911e+01
Information Content per bp:1.870
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.70%
Number of Background Sequences with motif7.9
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets60.0 +/- 24.2bp
Average Position of motif in Background60.9 +/- 21.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox17/MA0078.1/Jaspar

Match Rank:1
Score:0.73
Offset:2
Orientation:forward strand
Alignment:KGTYCATTGKCTR
--CTCATTGTC--
 A C G T A C T G A G C T A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G T C A G C T C T G A
A C G T A C G T G A C T G A C T G A T C C G T A A G C T A C G T A C T G A C G T A T G C A C G T A C G T

PB0168.1_Sox14_2/Jaspar

Match Rank:2
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:KGTYCATTGKCTR--
NNNCCATTGTGTNAN
 A C G T A C T G A G C T A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G T C A G C T C T G A A C G T A C G T
A T C G T G A C A C T G A G T C G A T C C G T A A C G T A C G T T A C G G C A T A T C G A G C T T C A G T G C A T C A G

Sox6/MA0515.1/Jaspar

Match Rank:3
Score:0.69
Offset:3
Orientation:forward strand
Alignment:KGTYCATTGKCTR
---CCATTGTTTT
 A C G T A C T G A G C T A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G T C A G C T C T G A
A C G T A C G T A C G T A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G C T G A C T A G C T

POL004.1_CCAAT-box/Jaspar

Match Rank:4
Score:0.69
Offset:3
Orientation:reverse strand
Alignment:KGTYCATTGKCTR--
---TGATTGGCTANN
 A C G T A C T G A G C T A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G T C A G C T C T G A A C G T A C G T
A C G T A C G T A C G T A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:5
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:KGTYCATTGKCTR
--NCCATTGTTY-
 A C G T A C T G A G C T A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G T C A G C T C T G A
A C G T A C G T C T A G A G T C G A T C G C T A C G A T A C G T A T C G A C G T A G C T G A C T A C G T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:6
Score:0.68
Offset:3
Orientation:forward strand
Alignment:KGTYCATTGKCTR
---CCATTGTTYB
 A C G T A C T G A G C T A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G T C A G C T C T G A
A C G T A C G T A C G T A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G

NFY(CCAAT)/Promoter/Homer

Match Rank:7
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:KGTYCATTGKCTR
--CCGATTGGCT-
 A C G T A C T G A G C T A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G T C A G C T C T G A
A C G T A C G T A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T A C G T

PB0166.1_Sox12_2/Jaspar

Match Rank:8
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:KGTYCATTGKCTR---
ANTCCTTTGTCTNNNN
 A C G T A C T G A G C T A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G T C A G C T C T G A A C G T A C G T A C G T
C G T A G C A T A C G T A G T C A T G C C G A T A G C T C G A T T C A G A C G T T A G C G A C T T C A G G C A T A C G T A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:9
Score:0.66
Offset:3
Orientation:forward strand
Alignment:KGTYCATTGKCTR
---CCWTTGTY--
 A C G T A C T G A G C T A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G T C A G C T C T G A
A C G T A C G T A C G T A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T A C G T A C G T

PB0132.1_Hbp1_2/Jaspar

Match Rank:10
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--KGTYCATTGKCTR--
TGTTCCCATTGTGTACT
 A C G T A C G T A C G T A C T G A G C T A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G T C A G C T C T G A A C G T A C G T
C G A T C T A G C A G T A G C T A G T C G A T C G A T C C G T A G A C T C G A T C A T G C A G T T C A G G A C T C T G A A T G C G C A T